The 2.0 version of rSNPBase

Variant report

Variant rs12321827
Chromosome Location chr12:9079276-9079277
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9068200-9084000 Weak transcription Esophagus oesophagus
2 chr12:9068200-9086400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:9068200-9088800 Weak transcription Gastric stomach
4 chr12:9068200-9091400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr12:9068200-9094200 Weak transcription Colonic Mucosa Colon
6 chr12:9068200-9094200 Weak transcription Lung lung
7 chr12:9068200-9094200 Weak transcription Psoas Muscle Psoas
8 chr12:9068200-9094200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:9068200-9094200 Weak transcription Small Intestine intestine
10 chr12:9068200-9100000 Weak transcription Stomach Mucosa stomach
11 chr12:9068600-9081200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr12:9068800-9081200 Weak transcription NHDF-Ad bronchial
13 chr12:9068800-9081600 Weak transcription Duodenum Mucosa Duodenum
14 chr12:9068800-9084400 Weak transcription Osteobl bone
15 chr12:9068800-9086400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr12:9069000-9079600 Weak transcription Fetal Brain Male brain
17 chr12:9069000-9086400 Weak transcription HepG2 liver
18 chr12:9069000-9094200 Weak transcription NHLF lung
19 chr12:9069400-9094000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr12:9069400-9094200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr12:9069600-9084400 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr12:9069600-9092000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr12:9069800-9082400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr12:9069800-9083600 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr12:9069800-9083800 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr12:9070400-9079600 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr12:9070400-9083400 Weak transcription K562 blood
28 chr12:9070400-9092000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr12:9070400-9092000 Strong transcription Fetal Muscle Trunk muscle
30 chr12:9070600-9092000 Strong transcription Stomach Smooth Muscle stomach
31 chr12:9070600-9092600 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr12:9070600-9092600 Strong transcription iPS-15b Cell Line embryonic stem cell
33 chr12:9071000-9087800 Strong transcription Fetal Brain Female brain
34 chr12:9071000-9092000 Strong transcription Fetal Muscle Leg muscle
35 chr12:9071200-9080400 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr12:9071200-9088000 Strong transcription Primary T cells from cord blood blood
37 chr12:9071400-9084400 Strong transcription Brain Germinal Matrix brain
38 chr12:9071400-9099400 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr12:9071600-9092000 Strong transcription H9 Cell Line embryonic stem cell
40 chr12:9071600-9092000 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr12:9071600-9100000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr12:9072200-9080200 Strong transcription Ovary ovary
43 chr12:9072400-9092000 Strong transcription iPS-18 Cell Line embryonic stem cell
44 chr12:9072400-9094200 Weak transcription NHEK skin
45 chr12:9072800-9082200 Weak transcription Aorta Aorta
46 chr12:9072800-9091000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr12:9072800-9094200 Weak transcription HSMM muscle
48 chr12:9073800-9099800 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr12:9074000-9082400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr12:9074200-9093800 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015