Variant report

Variant rs12327700
Chromosome Location chr19:20116641-20116642
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20107400-20118600 Weak transcription Right Atrium heart
2 chr19:20112000-20132600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:20112200-20148600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:20112400-20117200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:20113200-20126800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
6 chr19:20113400-20118200 Weak transcription Fetal Stomach stomach
7 chr19:20114600-20118400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr19:20114600-20122400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:20114600-20130800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr19:20114600-20136000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:20114800-20116800 Weak transcription Right Ventricle heart
12 chr19:20114800-20121200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr19:20114800-20122400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
14 chr19:20114800-20122600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
15 chr19:20114800-20123400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
16 chr19:20115000-20119800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
17 chr19:20115200-20116800 Weak transcription Fetal Brain Male brain
18 chr19:20115200-20121200 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr19:20115200-20121200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr19:20115400-20117000 Weak transcription Placenta Placenta
21 chr19:20115400-20121200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:20115400-20121600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr19:20115400-20123200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:20115800-20118400 Weak transcription Fetal Thymus thymus
25 chr19:20115800-20121400 ZNF genes & repeats Fetal Brain Female brain
26 chr19:20116200-20117200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:20116200-20118200 Weak transcription Lung lung
28 chr19:20116200-20119200 ZNF genes & repeats Primary T cells from cord blood blood
29 chr19:20116200-20119800 ZNF genes & repeats Fetal Lung lung
30 chr19:20116200-20121200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
31 chr19:20116200-20121400 ZNF genes & repeats Primary hematopoietic stem cells blood
32 chr19:20116400-20117000 Strong transcription Brain Hippocampus Middle brain
33 chr19:20116400-20117000 Weak transcription Thymus Thymus
34 chr19:20116400-20117600 ZNF genes & repeats Brain Anterior Caudate brain
35 chr19:20116400-20117600 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
36 chr19:20116400-20118600 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
37 chr19:20116400-20119400 ZNF genes & repeats Muscle Satellite Cultured Cells --
38 chr19:20116400-20119600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
39 chr19:20116400-20119600 ZNF genes & repeats HSMMtube muscle
40 chr19:20116400-20119600 ZNF genes & repeats NH-A brain
41 chr19:20116400-20120600 ZNF genes & repeats Dnd41 blood
42 chr19:20116400-20121200 ZNF genes & repeats H1 Cell Line embryonic stem cell
43 chr19:20116400-20121200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
44 chr19:20116400-20121600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
45 chr19:20116400-20134400 ZNF genes & repeats Liver Liver
46 chr19:20116600-20117000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:20116600-20117600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
48 chr19:20116600-20118600 ZNF genes & repeats Primary T killer memory cells from peripheral blood blood
49 chr19:20116600-20118800 ZNF genes & repeats Fetal Kidney kidney
50 chr19:20116600-20119000 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood

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