Variant report

Variant rs12330628
Chromosome Location chr3:17112724-17112725
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17089400-17135000 Weak transcription Pancreas Pancrea
2 chr3:17089800-17116000 Weak transcription Thymus Thymus
3 chr3:17095400-17114400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr3:17095400-17120600 Weak transcription Aorta Aorta
5 chr3:17095400-17120600 Weak transcription Lung lung
6 chr3:17096600-17118000 Weak transcription Fetal Intestine Small intestine
7 chr3:17097200-17113600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr3:17097600-17120400 Weak transcription Spleen Spleen
9 chr3:17103400-17134400 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr3:17106800-17113200 Strong transcription Primary B cells from cord blood blood
11 chr3:17106800-17118200 Strong transcription Primary monocytes fromperipheralblood blood
12 chr3:17107000-17133400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr3:17107200-17114800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr3:17107200-17126200 Weak transcription Fetal Kidney kidney
15 chr3:17107600-17116400 Strong transcription Primary B cells from peripheral blood blood
16 chr3:17107600-17122800 Weak transcription Fetal Muscle Trunk muscle
17 chr3:17108200-17120600 Weak transcription Stomach Smooth Muscle stomach
18 chr3:17108600-17118600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr3:17108800-17112800 Strong transcription Primary T cells from cord blood blood
20 chr3:17108800-17113000 Strong transcription Primary hematopoietic stem cells blood
21 chr3:17109000-17112800 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr3:17109000-17112800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr3:17109000-17117000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:17109200-17112800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr3:17109200-17113400 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr3:17109800-17120800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr3:17110400-17112800 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr3:17110400-17112800 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr3:17110400-17112800 Strong transcription Fetal Thymus thymus
30 chr3:17110600-17112800 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr3:17110600-17112800 Enhancers HUES48 Cell Line embryonic stem cell
32 chr3:17110600-17112800 Enhancers HUES6 Cell Line embryonic stem cell
33 chr3:17110600-17112800 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr3:17110800-17132200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr3:17111000-17112800 Enhancers HUES64 Cell Line embryonic stem cell
36 chr3:17111000-17112800 Genic enhancers Left Ventricle heart
37 chr3:17111000-17114600 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr3:17111400-17112800 Enhancers Fetal Muscle Leg muscle
39 chr3:17111400-17112800 Enhancers Skeletal Muscle Female skeletal muscle
40 chr3:17111400-17129400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr3:17111600-17112800 Enhancers H9 Cell Line embryonic stem cell
42 chr3:17111600-17112800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr3:17111600-17112800 Enhancers Skeletal Muscle Male skeletal muscle
44 chr3:17111800-17112800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr3:17111800-17112800 Genic enhancers Rectal Mucosa Donor 29 rectum
46 chr3:17111800-17114400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr3:17111800-17130600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr3:17112000-17115800 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr3:17112000-17132000 Weak transcription Duodenum Mucosa Duodenum
50 chr3:17112200-17112800 Genic enhancers Primary T helper naive cells fromperipheralblood blood

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