The 2.0 version of rSNPBase

Variant report

Variant rs17272747
Chromosome Location chr3:16984005-16984006
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:16959400-16986600 Weak transcription Aorta Aorta
2 chr3:16967000-16985000 Enhancers Primary T helper cells fromperipheralblood blood
3 chr3:16973800-16985000 Enhancers Primary T helper naive cells from peripheral blood blood
4 chr3:16974800-16984800 Weak transcription Stomach Mucosa stomach
5 chr3:16975600-16985000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr3:16975600-16985800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr3:16975800-16985000 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr3:16977800-16987400 Enhancers Primary T helper cells PMA-I stimulated --
9 chr3:16978000-16985800 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr3:16978000-16991200 Weak transcription Adipose Nuclei Adipose
11 chr3:16979000-16990600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr3:16979200-16984200 Weak transcription Primary monocytes fromperipheralblood blood
13 chr3:16979400-16985000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr3:16979400-16989800 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr3:16980000-16985000 Enhancers Primary hematopoietic stem cells blood
16 chr3:16980400-16985800 Weak transcription GM12878-XiMat blood
17 chr3:16981200-16985600 Enhancers Primary T cells from cord blood blood
18 chr3:16981400-16984200 Enhancers Left Ventricle heart
19 chr3:16981400-16984200 Enhancers Psoas Muscle Psoas
20 chr3:16981400-16986000 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr3:16981600-16984400 Enhancers Primary T cells fromperipheralblood blood
22 chr3:16981600-16985000 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr3:16982400-16984400 Enhancers Primary B cells from peripheral blood blood
24 chr3:16982400-16984400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr3:16982400-16984800 Enhancers Fetal Lung lung
26 chr3:16983000-16984400 Enhancers Pancreatic Islets Pancreatic Islet
27 chr3:16983000-16984800 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr3:16983000-16988600 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr3:16983200-16984800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr3:16983200-16985400 Weak transcription Ovary ovary
31 chr3:16983200-16985800 Weak transcription Fetal Intestine Large intestine
32 chr3:16983200-16985800 Weak transcription Fetal Intestine Small intestine
33 chr3:16983400-16987600 Enhancers Fetal Heart heart
34 chr3:16983600-16984600 Enhancers Primary B cells from cord blood blood
35 chr3:16983600-16985000 Enhancers Primary T regulatory cells fromperipheralblood blood
36 chr3:16983600-16985000 Enhancers Brain Angular Gyrus brain
37 chr3:16983800-16984200 Enhancers Gastric stomach
38 chr3:16983800-16984200 Enhancers Spleen Spleen
39 chr3:16983800-16984400 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr3:16983800-16984400 Enhancers Brain Anterior Caudate brain
41 chr3:16983800-16984800 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr3:16983800-16985000 Enhancers Small Intestine intestine
43 chr3:16983800-16986000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
44 chr3:16984000-16984400 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:16984000-16984600 Enhancers Fetal Brain Female brain
46 chr3:16984000-16985000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr3:16984000-16985800 Weak transcription Right Atrium heart
48 chr3:16984000-16985800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr3:16984000-16987200 Weak transcription Right Ventricle heart
50 chr3:16984000-16992600 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015