Variant report

Variant	rs12360095
Chromosome Location	chr10:97323052-97323053
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97321491..97323159-chr10:97323965..97326308,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12354465	0.86[ASN][1000 genomes]
rs12357513	0.86[ASN][1000 genomes]
rs12359410	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv552022	chr10:97308114-97328227	Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97321600-97324200	Weak transcription	Left Ventricle	heart
2	chr10:97321600-97324600	Weak transcription	Fetal Lung	lung
3	chr10:97321600-97325400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:97321600-97325600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr10:97321600-97327400	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr10:97321600-97327600	Weak transcription	Right Atrium	heart
7	chr10:97321600-97328000	Weak transcription	Lung	lung
8	chr10:97321600-97329200	Enhancers	Placenta	Placenta
9	chr10:97321600-97332200	Weak transcription	Right Ventricle	heart
10	chr10:97321800-97324600	Weak transcription	Fetal Stomach	stomach
11	chr10:97321800-97325000	Weak transcription	Hela-S3	cervix
12	chr10:97321800-97325400	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr10:97321800-97325600	Weak transcription	Brain Cingulate Gyrus	brain
14	chr10:97321800-97325800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr10:97321800-97327800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr10:97321800-97331800	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr10:97321800-97332200	Weak transcription	Brain Anterior Caudate	brain
18	chr10:97322000-97324600	Weak transcription	Stomach Smooth Muscle	stomach
19	chr10:97322000-97327600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr10:97322200-97323400	Enhancers	Fetal Intestine Large	intestine
21	chr10:97322200-97324600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr10:97322400-97323200	Enhancers	Fetal Intestine Small	intestine
23	chr10:97322400-97325000	Weak transcription	Fetal Muscle Leg	muscle
24	chr10:97322400-97328200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr10:97322400-97328200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr10:97322600-97324600	Weak transcription	Rectal Smooth Muscle	rectum
27	chr10:97323000-97323400	Weak transcription	HepG2	liver
28	chr10:97323000-97324800	Weak transcription	Colon Smooth Muscle	Colon
29	chr10:97323000-97328000	Weak transcription	Rectal Mucosa Donor 31	rectum

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