Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:50655915..50658373-chr8:50666894..50669710,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10957588	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10957593	1.00[EUR][1000 genomes]
rs10957612	0.94[EUR][1000 genomes]
rs11987121	1.00[EUR][1000 genomes]
rs12386929	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12544231	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12546420	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17745925	1.00[EUR][1000 genomes]
rs4276703	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4292702	1.00[EUR][1000 genomes]
rs4294194	1.00[EUR][1000 genomes]
rs4300021	1.00[EUR][1000 genomes]
rs4360302	1.00[EUR][1000 genomes]
rs4392910	1.00[EUR][1000 genomes]
rs4392911	1.00[EUR][1000 genomes]
rs4464979	1.00[EUR][1000 genomes]
rs4487792	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4593555	1.00[EUR][1000 genomes]
rs4609205	1.00[EUR][1000 genomes]
rs4873371	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4873372	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61135582	1.00[EUR][1000 genomes]
rs7009884	1.00[EUR][1000 genomes]
rs7814018	1.00[EUR][1000 genomes]
rs7838733	1.00[EUR][1000 genomes]
rs9298208	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917031	chr8:50207246-50709286	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3353749	chr8:50530807-51139242	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50667400-50668000	Enhancers	H1 Cell Line	embryonic stem cell
2	chr8:50667600-50668200	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr8:50667600-50668200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr8:50667800-50668200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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