The 2.0 version of rSNPBase

Variant report

Variant rs12402407
Chromosome Location chr1:169535633-169535634
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169506200-169542800 Weak transcription Right Ventricle heart
2 chr1:169524600-169541800 Weak transcription Placenta Placenta
3 chr1:169530200-169539000 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr1:169533200-169551600 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:169533400-169544600 Enhancers Stomach Mucosa stomach
6 chr1:169534000-169541400 Strong transcription Primary monocytes fromperipheralblood blood
7 chr1:169534200-169537000 Genic enhancers HepG2 liver
8 chr1:169534400-169536000 Enhancers Duodenum Mucosa Duodenum
9 chr1:169534600-169535800 Enhancers HUVEC blood vessel
10 chr1:169534600-169537400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:169534800-169535800 Enhancers Primary T helper cells PMA-I stimulated --
12 chr1:169534800-169535800 Enhancers NHEK skin
13 chr1:169534800-169538800 Enhancers Liver Liver
14 chr1:169535000-169535800 Enhancers Fetal Kidney kidney
15 chr1:169535000-169535800 Enhancers HMEC breast
16 chr1:169535200-169535800 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr1:169535200-169535800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:169535400-169540200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:169535600-169536000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
20 chr1:169535600-169538000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:169535600-169539400 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015