The 2.0 version of rSNPBase

Variant report

Variant rs12404054
Chromosome Location chr1:192575879-192575880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:13 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:192572400-192576200 Enhancers GM12878-XiMat blood
2 chr1:192572400-192577600 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:192572600-192578800 Weak transcription Colon Smooth Muscle Colon
4 chr1:192572800-192576400 Weak transcription Dnd41 blood
5 chr1:192574400-192577000 Weak transcription Rectal Smooth Muscle rectum
6 chr1:192574800-192578200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:192575000-192576400 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:192575000-192578200 Weak transcription HSMM muscle
9 chr1:192575000-192583800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:192575400-192577800 Weak transcription Primary T cells fromperipheralblood blood
11 chr1:192575400-192577800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:192575600-192577000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:192575600-192577000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015