Variant report

Variant rs12406945
Chromosome Location chr1:145103010-145103011
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145096800-145113400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:145097200-145110600 Weak transcription Pancreas Pancrea
3 chr1:145097200-145110800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:145097400-145103400 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:145097400-145113000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:145097400-145114200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:145097600-145108600 Weak transcription Fetal Muscle Trunk muscle
8 chr1:145097800-145110800 Weak transcription Fetal Stomach stomach
9 chr1:145097800-145118000 Weak transcription Colonic Mucosa Colon
10 chr1:145097800-145130000 Weak transcription Right Ventricle heart
11 chr1:145098000-145111400 Weak transcription Brain Anterior Caudate brain
12 chr1:145098000-145112200 Weak transcription H1 Cell Line embryonic stem cell
13 chr1:145098200-145103400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:145098200-145103600 Weak transcription Fetal Kidney kidney
15 chr1:145098200-145106000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:145098200-145106000 Weak transcription Fetal Lung lung
17 chr1:145098200-145107200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:145098200-145108400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr1:145098200-145109400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:145098200-145109400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr1:145098200-145110000 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:145098200-145110600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:145098200-145110600 Weak transcription Aorta Aorta
24 chr1:145098200-145112400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:145098200-145113800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:145098200-145118000 Weak transcription Brain Angular Gyrus brain
27 chr1:145098200-145118000 Weak transcription Stomach Smooth Muscle stomach
28 chr1:145098200-145122400 Weak transcription Brain Substantia Nigra brain
29 chr1:145098400-145104000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:145098400-145108400 Weak transcription Thymus Thymus
31 chr1:145098400-145109400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:145098400-145109400 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr1:145098400-145110800 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr1:145098400-145118000 Weak transcription Rectal Smooth Muscle rectum
35 chr1:145098800-145109600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:145099000-145103600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:145099000-145106000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr1:145099000-145109400 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr1:145099000-145111400 Weak transcription Colon Smooth Muscle Colon
40 chr1:145099000-145115800 Weak transcription Fetal Brain Female brain
41 chr1:145099200-145103400 Weak transcription HMEC breast
42 chr1:145099200-145109600 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:145099800-145103200 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:145099800-145105000 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:145099800-145105800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:145099800-145106200 Weak transcription Brain Hippocampus Middle brain
47 chr1:145099800-145109400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:145099800-145110800 Weak transcription Lung lung
49 chr1:145099800-145119400 Weak transcription Brain Cingulate Gyrus brain
50 chr1:145099800-145122400 Weak transcription Brain Germinal Matrix brain

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