Variant report

Variant rs3871984
Chromosome Location chr1:145112501-145112502
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145096800-145113400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:145097400-145113000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:145097400-145114200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:145097800-145118000 Weak transcription Colonic Mucosa Colon
5 chr1:145097800-145130000 Weak transcription Right Ventricle heart
6 chr1:145098200-145113800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:145098200-145118000 Weak transcription Brain Angular Gyrus brain
8 chr1:145098200-145118000 Weak transcription Stomach Smooth Muscle stomach
9 chr1:145098200-145122400 Weak transcription Brain Substantia Nigra brain
10 chr1:145098400-145118000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:145099000-145115800 Weak transcription Fetal Brain Female brain
12 chr1:145099800-145119400 Weak transcription Brain Cingulate Gyrus brain
13 chr1:145099800-145122400 Weak transcription Brain Germinal Matrix brain
14 chr1:145100400-145118000 Weak transcription Small Intestine intestine
15 chr1:145101200-145113200 Strong transcription Liver Liver
16 chr1:145102000-145113200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:145106400-145114000 Weak transcription Fetal Kidney kidney
18 chr1:145107200-145115600 Weak transcription Fetal Lung lung
19 chr1:145107400-145113600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr1:145107400-145116600 Strong transcription Primary B cells from peripheral blood blood
21 chr1:145107800-145112600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:145108000-145113200 Strong transcription Fetal Muscle Leg muscle
23 chr1:145108400-145112600 Strong transcription Skeletal Muscle Female skeletal muscle
24 chr1:145108400-145112600 Strong transcription Thymus Thymus
25 chr1:145109200-145118200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr1:145109200-145118400 Strong transcription Primary T cells fromperipheralblood blood
27 chr1:145109400-145113000 Strong transcription HMEC breast
28 chr1:145109400-145113200 ZNF genes & repeats Primary B cells from cord blood blood
29 chr1:145109400-145113200 Genic enhancers Muscle Satellite Cultured Cells --
30 chr1:145109400-145113200 Genic enhancers Osteobl bone
31 chr1:145109400-145114000 Genic enhancers NHDF-Ad bronchial
32 chr1:145109400-145115600 Weak transcription Gastric stomach
33 chr1:145109400-145116200 Strong transcription Dnd41 blood
34 chr1:145109800-145112800 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr1:145109800-145114600 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr1:145109800-145115800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:145110000-145113200 Strong transcription Adipose Nuclei Adipose
38 chr1:145110000-145113200 Strong transcription Placenta Amnion Placenta Amnion
39 chr1:145110000-145114200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:145110000-145117400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:145110000-145118200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr1:145110200-145113200 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr1:145110200-145122000 Weak transcription Brain Hippocampus Middle brain
44 chr1:145110400-145113200 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr1:145110400-145114200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:145110400-145114400 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr1:145110400-145119600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr1:145110600-145112600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:145110600-145112600 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr1:145110600-145112600 Strong transcription Aorta Aorta

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