The 2.0 version of rSNPBase

Variant report

Variant rs12408410
Chromosome Location chr1:57386093-57386094
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57382200-57390200 Weak transcription Right Ventricle heart
2 chr1:57383000-57386200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:57383200-57390800 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr1:57383400-57386200 Weak transcription Gastric stomach
5 chr1:57383600-57386200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:57383600-57386200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:57383600-57386400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:57384200-57387400 Enhancers Liver Liver
9 chr1:57384600-57386600 Enhancers Pancreas Pancrea
10 chr1:57385400-57386400 Weak transcription Fetal Kidney kidney
11 chr1:57385400-57388000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:57385400-57388600 Enhancers HepG2 liver
13 chr1:57385600-57387400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:57386000-57387400 Enhancers NHDF-Ad bronchial
15 chr1:57386000-57388000 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015