Variant report

Variant	rs12432470
Chromosome Location	chr14:69780678-69780679
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69780441..69783406-chr14:69787720..69789351,2	MCF-7	breast:
2	chr14:69780412..69782317-chr14:69783911..69786193,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10459533	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10459534	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10498529	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11158802	0.98[ASN][1000 genomes]
rs12432549	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12433032	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12433349	0.83[EUR][1000 genomes]
rs12434956	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12435957	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12436823	0.84[EUR][1000 genomes]
rs12437400	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12881742	0.84[EUR][1000 genomes]
rs1563295	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs17106899	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2185494	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2331960	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8008082	0.82[EUR][1000 genomes]
rs8011772	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs867402	0.82[ASW][hapmap];0.93[CEU][hapmap];0.88[TSI][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs956134	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69777600-69783200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:69779000-69781400	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr14:69779000-69786200	Enhancers	Left Ventricle	heart
4	chr14:69779400-69780800	Enhancers	Right Ventricle	heart
5	chr14:69779600-69781200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr14:69779600-69782200	Weak transcription	Fetal Intestine Small	intestine
7	chr14:69779600-69782200	Weak transcription	Spleen	Spleen
8	chr14:69779800-69783200	Weak transcription	Right Atrium	heart
9	chr14:69780000-69781200	Weak transcription	Brain Cingulate Gyrus	brain
10	chr14:69780000-69782000	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr14:69780200-69781800	Weak transcription	Brain Anterior Caudate	brain
12	chr14:69780200-69782800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr14:69780200-69783200	Weak transcription	Fetal Muscle Trunk	muscle
14	chr14:69780200-69792600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr14:69780400-69781200	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr14:69780400-69783200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr14:69780400-69792600	Weak transcription	Brain Angular Gyrus	brain
18	chr14:69780600-69782000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr14:69780600-69782200	Weak transcription	Fetal Muscle Leg	muscle

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