Variant report

Variant	rs12434661
Chromosome Location	chr14:26408567-26408568
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10147622	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10151818	0.87[ASN][1000 genomes]
rs10152034	0.88[ASN][1000 genomes]
rs11159589	0.87[EUR][1000 genomes]
rs12880493	0.81[ASN][1000 genomes]
rs12880504	0.81[ASN][1000 genomes]
rs12882184	0.81[ASN][1000 genomes]
rs12893923	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1950946	0.81[ASN][1000 genomes]
rs1956605	0.81[ASN][1000 genomes]
rs1956608	0.97[ASN][1000 genomes]
rs1956616	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2447135	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038014	chr14:26191545-26439394	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:26387000-26413000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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