Variant report
Variant | rs12435632 |
---|---|
Chromosome Location | chr14:85614076-85614077 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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rs_ID | r2[population] |
---|---|
rs10147553 | 0.94[ASN][1000 genomes] |
rs10498579 | 0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12100468 | 0.82[ASN][1000 genomes] |
rs12432779 | 0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs12879255 | 1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs12887049 | 0.84[ASN][1000 genomes] |
rs12892485 | 0.94[ASN][1000 genomes] |
rs12895341 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs12897852 | 0.83[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs1449411 | 0.80[ASN][1000 genomes] |
rs1449430 | 0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs1449431 | 0.80[ASN][1000 genomes] |
rs17120779 | 1.00[ASN][1000 genomes] |
rs17258547 | 0.80[EUR][1000 genomes] |
rs17796484 | 1.00[ASN][1000 genomes] |
rs2372836 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2372841 | 0.87[ASN][1000 genomes] |
rs2372846 | 0.82[ASN][1000 genomes] |
rs2888425 | 0.89[ASN][1000 genomes] |
rs2888426 | 0.86[ASN][1000 genomes] |
rs36080287 | 1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs4243673 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs4577003 | 0.90[ASN][1000 genomes] |
rs4904236 | 0.82[ASN][1000 genomes] |
rs4904237 | 1.00[AFR][1000 genomes] |
rs67029848 | 1.00[AFR][1000 genomes] |
rs7143105 | 0.82[ASN][1000 genomes] |
rs7151475 | 0.82[ASN][1000 genomes] |
rs7152160 | 0.82[ASN][1000 genomes] |
rs72685722 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.80[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2751288 | chr14:84815330-85704047 | Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | nsv1048026 | chr14:85330544-85686322 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | esv3401331 | chr14:85332747-85716351 | Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
4 | nsv565423 | chr14:85427846-85638746 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
5 | nsv832846 | chr14:85517736-85715650 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
6 | nsv456355 | chr14:85565987-85616803 | Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
7 | nsv565425 | chr14:85565987-85616803 | Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:85611400-85615000 | Weak transcription | Fetal Intestine Small | intestine |