Variant report

Variant	rs12435950
Chromosome Location	chr14:42480374-42480375
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1471852	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1624840	0.84[EUR][1000 genomes]
rs1684683	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1684706	0.84[EUR][1000 genomes]
rs1684719	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1763277	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1763279	0.85[EUR][1000 genomes]
rs1763281	0.87[EUR][1000 genomes]
rs1763282	0.87[EUR][1000 genomes]
rs1763283	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2029184	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61988713	0.80[EUR][1000 genomes]
rs7147055	1.00[CHB][hapmap]
rs923208	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564563	chr14:42477256-42644617	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:42480000-42484200	Enhancers	Primary B cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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