Variant report

Variant rs12464785
Chromosome Location chr2:99938942-99938943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99901600-99941200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr2:99915000-99942800 Weak transcription Aorta Aorta
3 chr2:99917200-99948200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:99921000-99942000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:99921600-99939200 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:99922600-99939000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:99928200-99951800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr2:99932000-99951400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr2:99933000-99949800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:99933000-99950000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:99933400-99940400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:99933400-99940600 Strong transcription Left Ventricle heart
13 chr2:99933400-99945800 Strong transcription Primary T helper naive cells fromperipheralblood blood
14 chr2:99933400-99946800 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr2:99933400-99949000 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr2:99933400-99949600 Strong transcription Fetal Muscle Leg muscle
17 chr2:99933400-99949600 Strong transcription Skeletal Muscle Female skeletal muscle
18 chr2:99933400-99949800 Strong transcription Duodenum Mucosa Duodenum
19 chr2:99933400-99950400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr2:99933400-99950600 Strong transcription Primary neutrophils fromperipheralblood blood
21 chr2:99933400-99950600 Strong transcription Fetal Thymus thymus
22 chr2:99933600-99939200 Strong transcription Primary T cells from cord blood blood
23 chr2:99933600-99939200 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr2:99933600-99949000 Strong transcription Thymus Thymus
25 chr2:99933600-99949400 Strong transcription Primary hematopoietic stem cells short term culture blood
26 chr2:99933600-99949600 Strong transcription H1 Cell Line embryonic stem cell
27 chr2:99933600-99949600 Strong transcription HUES48 Cell Line embryonic stem cell
28 chr2:99933600-99949600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:99933600-99949600 Strong transcription Liver Liver
30 chr2:99933600-99949600 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr2:99933600-99949800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:99933600-99949800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:99933600-99949800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr2:99933600-99949800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:99933600-99949800 Strong transcription Adipose Nuclei Adipose
36 chr2:99933600-99949800 Strong transcription Fetal Muscle Trunk muscle
37 chr2:99933600-99949800 Strong transcription Dnd41 blood
38 chr2:99933600-99949800 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr2:99933600-99950000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr2:99933600-99950000 Strong transcription Primary B cells from peripheral blood blood
41 chr2:99933600-99950000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr2:99933600-99950000 Strong transcription GM12878-XiMat blood
43 chr2:99933600-99950200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:99933600-99950400 Strong transcription HUES6 Cell Line embryonic stem cell
45 chr2:99933600-99950400 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr2:99933600-99950400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr2:99933600-99950400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr2:99933600-99950800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr2:99933800-99945000 Strong transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:99933800-99948800 Strong transcription HepG2 liver

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