Variant report
| Variant | rs12485530 |
|---|---|
| Chromosome Location | chr3:43126575-43126576 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:43118200-43128000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 2 | chr3:43118600-43127800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr3:43119000-43129600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 4 | chr3:43119400-43129800 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr3:43119600-43130400 | Weak transcription | Hela-S3 | cervix |
| 6 | chr3:43119600-43135000 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr3:43119800-43143800 | Weak transcription | Fetal Heart | heart |
| 8 | chr3:43122400-43134400 | Weak transcription | HepG2 | liver |
| 9 | chr3:43122400-43145800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 10 | chr3:43122600-43128200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 11 | chr3:43122600-43130200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 12 | chr3:43122600-43145200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 13 | chr3:43122800-43127800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 14 | chr3:43122800-43128600 | Weak transcription | Liver | Liver |
| 15 | chr3:43122800-43129200 | Weak transcription | Brain Anterior Caudate | brain |
| 16 | chr3:43122800-43132200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 17 | chr3:43122800-43132200 | Weak transcription | Fetal Lung | lung |
| 18 | chr3:43122800-43133000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr3:43122800-43134800 | Weak transcription | Brain Substantia Nigra | brain |
| 20 | chr3:43122800-43136000 | Weak transcription | Pancreas | Pancrea |
| 21 | chr3:43122800-43136400 | Weak transcription | HSMMtube | muscle |
| 22 | chr3:43122800-43145600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr3:43123000-43128000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 24 | chr3:43123000-43129600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 25 | chr3:43123000-43132200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 26 | chr3:43123000-43132600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 27 | chr3:43123000-43135200 | Weak transcription | Brain Angular Gyrus | brain |
| 28 | chr3:43123000-43136000 | Weak transcription | Right Ventricle | heart |
| 29 | chr3:43123000-43144400 | Weak transcription | Fetal Intestine Large | intestine |
| 30 | chr3:43123000-43146400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 31 | chr3:43123000-43146600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 32 | chr3:43123200-43127800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 33 | chr3:43123200-43132000 | Weak transcription | Colon Smooth Muscle | Colon |
| 34 | chr3:43123200-43140400 | Weak transcription | Gastric | stomach |
| 35 | chr3:43123200-43144400 | Weak transcription | Spleen | Spleen |
| 36 | chr3:43123200-43145000 | Weak transcription | Adipose Nuclei | Adipose |
| 37 | chr3:43123400-43130000 | Weak transcription | Brain Hippocampus Middle | brain |
| 38 | chr3:43123400-43146400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr3:43123600-43127000 | Weak transcription | Brain Germinal Matrix | brain |
| 40 | chr3:43123600-43128800 | Weak transcription | Esophagus | oesophagus |
| 41 | chr3:43123600-43135000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 42 | chr3:43123600-43135400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 43 | chr3:43123600-43143600 | Weak transcription | Lung | lung |
| 44 | chr3:43123600-43146600 | Weak transcription | Fetal Intestine Small | intestine |
| 45 | chr3:43123800-43129800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 46 | chr3:43123800-43129800 | Weak transcription | Fetal Stomach | stomach |
| 47 | chr3:43123800-43132400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 48 | chr3:43123800-43136400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 49 | chr3:43124000-43133400 | Weak transcription | Fetal Brain Male | brain |
| 50 | chr3:43124000-43134600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
