The 2.0 version of rSNPBase

Variant report

Variant rs12488535
Chromosome Location chr3:119184991-119184992
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119183000-119187000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:119183000-119187200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr3:119183000-119187200 Weak transcription Right Atrium heart
4 chr3:119183000-119187400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:119183000-119187400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:119183000-119187400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:119183000-119187400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr3:119183000-119187400 Weak transcription Fetal Muscle Trunk muscle
9 chr3:119183000-119187400 Weak transcription Gastric stomach
10 chr3:119183000-119187400 Weak transcription Ovary ovary
11 chr3:119183000-119187400 Weak transcription Small Intestine intestine
12 chr3:119183200-119186800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr3:119183200-119186800 Weak transcription Primary monocytes fromperipheralblood blood
14 chr3:119183200-119186800 Weak transcription Primary B cells from peripheral blood blood
15 chr3:119183200-119186800 Weak transcription Brain Substantia Nigra brain
16 chr3:119183200-119186800 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr3:119183200-119186800 Weak transcription Fetal Brain Male brain
18 chr3:119183200-119186800 Weak transcription Right Ventricle heart
19 chr3:119183200-119186800 Weak transcription Hela-S3 cervix
20 chr3:119183200-119187000 Weak transcription H1 Cell Line embryonic stem cell
21 chr3:119183200-119187000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:119183200-119187000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr3:119183200-119187000 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr3:119183200-119187000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr3:119183200-119187000 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr3:119183200-119187000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr3:119183200-119187000 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr3:119183200-119187000 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr3:119183200-119187000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr3:119183200-119187000 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr3:119183200-119187000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:119183200-119187000 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr3:119183200-119187000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr3:119183200-119187000 Weak transcription Muscle Satellite Cultured Cells --
35 chr3:119183200-119187000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:119183200-119187000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr3:119183200-119187000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr3:119183200-119187000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr3:119183200-119187000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr3:119183200-119187000 Weak transcription Adipose Nuclei Adipose
41 chr3:119183200-119187000 Weak transcription Liver Liver
42 chr3:119183200-119187000 Weak transcription Brain Anterior Caudate brain
43 chr3:119183200-119187000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr3:119183200-119187000 Weak transcription Colon Smooth Muscle Colon
45 chr3:119183200-119187000 Weak transcription Fetal Heart heart
46 chr3:119183200-119187000 Weak transcription Fetal Intestine Large intestine
47 chr3:119183200-119187000 Weak transcription Fetal Intestine Small intestine
48 chr3:119183200-119187000 Weak transcription Fetal Lung lung
49 chr3:119183200-119187000 Weak transcription Rectal Smooth Muscle rectum
50 chr3:119183200-119187000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015