Variant report

Variant rs12495539
Chromosome Location chr3:119137912-119137913
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119080000-119145600 Weak transcription Fetal Kidney kidney
2 chr3:119082800-119138000 Weak transcription Small Intestine intestine
3 chr3:119085200-119139000 Strong transcription Cortex derived primary cultured neurospheres brain
4 chr3:119098400-119138200 Strong transcription Adipose Nuclei Adipose
5 chr3:119110200-119140800 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr3:119112000-119147400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr3:119112200-119138800 Weak transcription Colonic Mucosa Colon
8 chr3:119113200-119140400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr3:119113400-119138000 Strong transcription Fetal Stomach stomach
10 chr3:119119000-119138800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr3:119121200-119150000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr3:119127200-119138200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr3:119129000-119138400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr3:119130200-119139200 Weak transcription Rectal Smooth Muscle rectum
15 chr3:119130600-119138400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:119130800-119143600 Weak transcription GM12878-XiMat blood
17 chr3:119132800-119138000 Strong transcription Lung lung
18 chr3:119133600-119140400 Weak transcription NHLF lung
19 chr3:119133800-119147400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr3:119134000-119138200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr3:119134200-119148800 Weak transcription Pancreas Pancrea
22 chr3:119134400-119138800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr3:119134600-119147600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr3:119134800-119139400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:119134800-119147400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:119135000-119139000 Weak transcription Fetal Intestine Small intestine
27 chr3:119135000-119139200 Weak transcription Right Atrium heart
28 chr3:119135000-119140800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:119135000-119147400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr3:119135000-119147600 Weak transcription Fetal Thymus thymus
31 chr3:119135000-119147800 Weak transcription Placenta Placenta
32 chr3:119135000-119148000 Weak transcription Aorta Aorta
33 chr3:119135200-119139200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr3:119135200-119139600 Weak transcription Fetal Muscle Leg muscle
35 chr3:119135200-119139800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr3:119135200-119140800 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr3:119135200-119145000 Weak transcription Muscle Satellite Cultured Cells --
38 chr3:119135200-119149800 Weak transcription Gastric stomach
39 chr3:119135400-119139000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr3:119135400-119139000 Weak transcription Brain Hippocampus Middle brain
41 chr3:119135400-119145600 Weak transcription HUVEC blood vessel
42 chr3:119135400-119147800 Weak transcription Ovary ovary
43 chr3:119135400-119148000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr3:119135400-119150000 Weak transcription Spleen Spleen
45 chr3:119135600-119139200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr3:119136600-119138000 Strong transcription Fetal Muscle Trunk muscle
47 chr3:119136800-119138000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr3:119136800-119139000 Weak transcription Right Ventricle heart
49 chr3:119136800-119145600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr3:119137000-119138000 Enhancers HSMM muscle

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