Variant report

Variant rs12490642
Chromosome Location chr3:195616208-195616209
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195589400-195621800 Weak transcription Small Intestine intestine
2 chr3:195589800-195618800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr3:195589800-195619600 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr3:195590600-195617000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr3:195595600-195618800 Weak transcription Fetal Kidney kidney
6 chr3:195602600-195616800 Strong transcription Primary B cells from peripheral blood blood
7 chr3:195604800-195617000 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr3:195604800-195621600 Weak transcription A549 lung
9 chr3:195605600-195620000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr3:195606400-195621000 Weak transcription Hela-S3 cervix
11 chr3:195606600-195620600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr3:195607200-195616600 Weak transcription Rectal Smooth Muscle rectum
13 chr3:195609200-195621000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr3:195609600-195618600 Weak transcription Colon Smooth Muscle Colon
15 chr3:195610200-195616400 Genic enhancers Fetal Muscle Trunk muscle
16 chr3:195611000-195618800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr3:195611000-195620600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr3:195611600-195617000 Enhancers Fetal Heart heart
19 chr3:195611600-195617000 Enhancers Psoas Muscle Psoas
20 chr3:195612200-195618800 Weak transcription Pancreas Pancrea
21 chr3:195612800-195618400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr3:195612800-195621800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr3:195613400-195618400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr3:195613600-195616400 Weak transcription H9 Cell Line embryonic stem cell
25 chr3:195613600-195616400 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr3:195613600-195617200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr3:195613600-195618800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr3:195613600-195621600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr3:195613800-195616400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr3:195613800-195616400 Weak transcription Muscle Satellite Cultured Cells --
31 chr3:195613800-195616400 Weak transcription Fetal Lung lung
32 chr3:195613800-195616400 Weak transcription NH-A brain
33 chr3:195613800-195617000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr3:195613800-195617600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:195613800-195619400 Weak transcription Stomach Mucosa stomach
36 chr3:195614000-195618600 Weak transcription NHDF-Ad bronchial
37 chr3:195614000-195618800 Weak transcription Ovary ovary
38 chr3:195614200-195616400 Weak transcription HUVEC blood vessel
39 chr3:195614200-195616400 Weak transcription K562 blood
40 chr3:195614600-195616400 Enhancers Brain Cingulate Gyrus brain
41 chr3:195615000-195616400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr3:195615000-195617800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
43 chr3:195615000-195619000 Weak transcription Fetal Intestine Large intestine
44 chr3:195615000-195621200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr3:195615200-195616400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:195615200-195616400 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr3:195615200-195616600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr3:195615200-195616600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr3:195615200-195616600 Weak transcription Stomach Smooth Muscle stomach
50 chr3:195615200-195617200 Enhancers ES-WA7 Cell Line embryonic stem cell

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