Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10516878	0.86[CEU][hapmap]
rs11097267	0.86[CEU][hapmap]
rs11727543	0.86[CEU][hapmap]
rs11932857	0.86[CEU][hapmap]
rs11934481	0.86[CEU][hapmap]
rs11942486	0.86[CEU][hapmap]
rs1377918	0.86[CEU][hapmap]
rs1377919	0.85[CEU][hapmap]
rs17017583	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17017652	0.85[CEU][hapmap]
rs2085096	0.86[CEU][hapmap]
rs2123960	0.86[CEU][hapmap]
rs2123961	0.86[CEU][hapmap]
rs2168076	0.86[CEU][hapmap]
rs2168077	0.86[CEU][hapmap]
rs4571297	0.86[CEU][hapmap]
rs6532246	0.86[CEU][hapmap]
rs6532248	0.85[CEU][hapmap]
rs6532249	0.85[CEU][hapmap]
rs6815961	0.86[CEU][hapmap]
rs6821319	0.86[CEU][hapmap]
rs6822836	0.85[CEU][hapmap]
rs6843367	0.85[CEU][hapmap]
rs7438052	0.82[CEU][hapmap]
rs7666834	0.86[CEU][hapmap]
rs7678591	0.85[CEU][hapmap]
rs7698270	0.86[CEU][hapmap]
rs9998288	0.88[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931074	chr4:90970476-91753697	Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv534470	chr4:91342219-91842807	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv428766	chr4:91618397-91768647	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv879552	chr4:91691313-91729462	Enhancers Active TSS Weak transcription ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases
5	nsv879553	chr4:91691313-91868576	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv879554	chr4:91692287-91731886	Enhancers Weak transcription Active TSS ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91713000-91714200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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