The 2.0 version of rSNPBase

Variant report

Variant rs12504167
Chromosome Location chr4:22508828-22508829
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:22488600-22516000 Weak transcription Primary hematopoietic stem cells blood
2 chr4:22497000-22515600 Weak transcription Fetal Stomach stomach
3 chr4:22500400-22510600 Enhancers HUES48 Cell Line embryonic stem cell
4 chr4:22500400-22510600 Enhancers HMEC breast
5 chr4:22500600-22510800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr4:22502200-22515600 Weak transcription Primary T cells from cord blood blood
7 chr4:22502800-22509800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr4:22502800-22515600 Weak transcription Fetal Kidney kidney
9 chr4:22503200-22515600 Weak transcription NHDF-Ad bronchial
10 chr4:22504000-22514200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr4:22504800-22509200 Weak transcription Placenta Placenta
12 chr4:22504800-22509400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr4:22504800-22510800 Enhancers HUES64 Cell Line embryonic stem cell
14 chr4:22504800-22512200 Weak transcription Duodenum Mucosa Duodenum
15 chr4:22504800-22513400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr4:22504800-22514200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr4:22505000-22509200 Weak transcription NH-A brain
18 chr4:22505000-22515200 Weak transcription Muscle Satellite Cultured Cells --
19 chr4:22505200-22509000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr4:22505200-22512200 Weak transcription Fetal Intestine Large intestine
21 chr4:22505400-22509000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr4:22505400-22509000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr4:22505400-22509000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:22505400-22509400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr4:22505400-22509800 Weak transcription Hela-S3 cervix
26 chr4:22505400-22511800 Weak transcription Fetal Intestine Small intestine
27 chr4:22505400-22515400 Weak transcription A549 lung
28 chr4:22505600-22509200 Weak transcription Brain Anterior Caudate brain
29 chr4:22505600-22510400 Enhancers Liver Liver
30 chr4:22505600-22513200 Weak transcription Fetal Muscle Trunk muscle
31 chr4:22505600-22515600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr4:22505800-22509000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:22506000-22510800 Enhancers H9 Cell Line embryonic stem cell
34 chr4:22506200-22510800 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr4:22506400-22509200 Weak transcription Fetal Lung lung
36 chr4:22506400-22511800 Weak transcription Left Ventricle heart
37 chr4:22506400-22513800 Weak transcription Brain Germinal Matrix brain
38 chr4:22506600-22509200 Weak transcription Fetal Muscle Leg muscle
39 chr4:22506600-22511800 Weak transcription Esophagus oesophagus
40 chr4:22506600-22515800 Weak transcription Aorta Aorta
41 chr4:22506800-22509400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr4:22506800-22510200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr4:22506800-22511800 Weak transcription Right Ventricle heart
44 chr4:22507000-22509000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr4:22507000-22509200 Weak transcription Osteobl bone
46 chr4:22507000-22510200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr4:22507000-22515200 Weak transcription HSMM muscle
48 chr4:22507200-22509000 Weak transcription NHEK skin
49 chr4:22507200-22510600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr4:22507400-22515400 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015