The 2.0 version of rSNPBase

Variant report

Variant rs12506478
Chromosome Location chr4:16191362-16191363
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:16161800-16193200 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr4:16163200-16195800 Weak transcription HMEC breast
3 chr4:16164400-16195000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr4:16168000-16208000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr4:16168000-16213800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr4:16168200-16198000 Weak transcription A549 lung
7 chr4:16168400-16194600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr4:16168400-16197800 Weak transcription NHLF lung
9 chr4:16168400-16198000 Weak transcription NH-A brain
10 chr4:16168600-16198000 Weak transcription NHEK skin
11 chr4:16170400-16191400 Weak transcription Colonic Mucosa Colon
12 chr4:16170800-16208000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr4:16171400-16207200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr4:16171600-16191600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr4:16171600-16194400 Weak transcription Placenta Amnion Placenta Amnion
16 chr4:16171600-16198000 Weak transcription H1 Cell Line embryonic stem cell
17 chr4:16172000-16198000 Weak transcription HSMMtube muscle
18 chr4:16174400-16196800 Weak transcription Stomach Mucosa stomach
19 chr4:16176200-16198000 Weak transcription HSMM muscle
20 chr4:16177000-16194000 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr4:16178800-16191400 Weak transcription Gastric stomach
22 chr4:16179200-16196000 Weak transcription Fetal Heart heart
23 chr4:16180800-16192600 Weak transcription H9 Cell Line embryonic stem cell
24 chr4:16181000-16197800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr4:16181000-16197800 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr4:16181200-16223800 Weak transcription Fetal Brain Male brain
27 chr4:16182600-16194800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr4:16183600-16193600 Strong transcription Liver Liver
29 chr4:16184200-16197600 Strong transcription Primary B cells from cord blood blood
30 chr4:16184200-16198000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr4:16184200-16200600 Strong transcription Fetal Thymus thymus
32 chr4:16184400-16194200 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr4:16185200-16193400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr4:16185400-16196000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr4:16185400-16197400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr4:16185600-16193200 Strong transcription Primary monocytes fromperipheralblood blood
37 chr4:16185600-16197600 Strong transcription Primary T helper cells PMA-I stimulated --
38 chr4:16186000-16193200 Strong transcription Primary T cells fromperipheralblood blood
39 chr4:16186000-16193200 Strong transcription Fetal Intestine Large intestine
40 chr4:16186200-16193400 Strong transcription Placenta Placenta
41 chr4:16186200-16197400 Strong transcription Primary B cells from peripheral blood blood
42 chr4:16186400-16197600 Strong transcription Primary T helper cells fromperipheralblood blood
43 chr4:16186600-16193000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr4:16186800-16198000 Weak transcription Muscle Satellite Cultured Cells --
45 chr4:16187200-16191400 Weak transcription Aorta Aorta
46 chr4:16187200-16193000 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr4:16187200-16193800 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr4:16187200-16194000 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr4:16187200-16196400 Strong transcription Dnd41 blood
50 chr4:16187400-16193600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015