Variant report

Variant rs12517127
Chromosome Location chr5:167726942-167726943
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:167720600-167727000 Weak transcription GM12878-XiMat blood
2 chr5:167722800-167729200 Weak transcription Esophagus oesophagus
3 chr5:167723000-167727200 Weak transcription HSMMtube muscle
4 chr5:167723000-167728800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr5:167723000-167728800 Weak transcription Adipose Nuclei Adipose
6 chr5:167723000-167728800 Weak transcription NHDF-Ad bronchial
7 chr5:167723000-167729200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr5:167723000-167730400 Weak transcription Lung lung
9 chr5:167723200-167727400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr5:167723400-167728800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr5:167723400-167728800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr5:167723400-167728800 Weak transcription Fetal Heart heart
13 chr5:167723400-167728800 Weak transcription Osteobl bone
14 chr5:167723600-167728600 Weak transcription Fetal Intestine Large intestine
15 chr5:167724000-167727200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr5:167724000-167728000 Weak transcription Fetal Intestine Small intestine
17 chr5:167724000-167728800 Weak transcription HepG2 liver
18 chr5:167724200-167727000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:167724200-167729000 Weak transcription Fetal Kidney kidney
20 chr5:167724200-167731600 Weak transcription Liver Liver
21 chr5:167724200-167733200 Weak transcription Placenta Placenta
22 chr5:167725200-167729800 Enhancers Pancreas Pancrea
23 chr5:167726000-167727000 Enhancers Brain Anterior Caudate brain
24 chr5:167726000-167727200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
25 chr5:167726000-167727400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr5:167726000-167727600 Enhancers Cortex derived primary cultured neurospheres brain
27 chr5:167726000-167728000 Enhancers Brain Cingulate Gyrus brain
28 chr5:167726000-167729400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr5:167726000-167729400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr5:167726000-167730600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr5:167726000-167730800 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr5:167726200-167727000 Enhancers H9 Cell Line embryonic stem cell
33 chr5:167726200-167727600 Enhancers Fetal Brain Female brain
34 chr5:167726200-167728000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:167726200-167728200 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr5:167726200-167729200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:167726200-167729400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:167726200-167729600 Enhancers H1 Cell Line embryonic stem cell
39 chr5:167726200-167729600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:167726200-167729600 Enhancers HUES48 Cell Line embryonic stem cell
41 chr5:167726200-167729600 Enhancers HUES64 Cell Line embryonic stem cell
42 chr5:167726200-167730600 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr5:167726400-167728000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr5:167726400-167728200 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr5:167726400-167728800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:167726400-167729800 Enhancers HUES6 Cell Line embryonic stem cell
47 chr5:167726600-167727000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr5:167726600-167727000 Weak transcription Fetal Brain Male brain
49 chr5:167726600-167727200 Enhancers Gastric stomach
50 chr5:167726600-167728200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell

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