The 2.0 version of rSNPBase

Variant report

Variant rs12518256
Chromosome Location chr5:115773362-115773363
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115723000-115776000 Weak transcription Primary hematopoietic stem cells blood
2 chr5:115723600-115784800 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr5:115748600-115783000 Weak transcription Thymus Thymus
4 chr5:115749400-115782000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:115750200-115779400 Weak transcription Fetal Intestine Small intestine
6 chr5:115751600-115774800 Weak transcription Fetal Muscle Trunk muscle
7 chr5:115752800-115779400 Weak transcription Fetal Intestine Large intestine
8 chr5:115757000-115774000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:115757200-115782000 Weak transcription Gastric stomach
10 chr5:115757400-115775400 Weak transcription Adipose Nuclei Adipose
11 chr5:115759000-115773600 Weak transcription Fetal Kidney kidney
12 chr5:115759800-115776400 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr5:115760000-115781400 Weak transcription Primary B cells from peripheral blood blood
14 chr5:115761600-115773400 Weak transcription Liver Liver
15 chr5:115761600-115773400 Weak transcription HepG2 liver
16 chr5:115768000-115774600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr5:115768400-115774600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr5:115768400-115777000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr5:115768400-115777800 Weak transcription Ovary ovary
20 chr5:115768400-115781800 Weak transcription Fetal Lung lung
21 chr5:115768800-115780600 Weak transcription Primary B cells from cord blood blood
22 chr5:115769800-115777800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr5:115771000-115774400 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr5:115771200-115773400 Enhancers K562 blood
25 chr5:115771800-115773400 Enhancers Left Ventricle heart
26 chr5:115771800-115775000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr5:115772000-115781200 Enhancers Brain Inferior Temporal Lobe brain
28 chr5:115772000-115781800 Weak transcription Spleen Spleen
29 chr5:115772200-115779000 Enhancers Brain Angular Gyrus brain
30 chr5:115772200-115781400 Enhancers Brain Hippocampus Middle brain
31 chr5:115772400-115774200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
32 chr5:115772400-115777000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr5:115772400-115781400 Enhancers Brain Substantia Nigra brain
34 chr5:115772600-115774400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr5:115772600-115775200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr5:115772600-115781200 Enhancers Brain Cingulate Gyrus brain
37 chr5:115772800-115774000 Weak transcription Right Ventricle heart
38 chr5:115772800-115774400 Weak transcription Psoas Muscle Psoas
39 chr5:115772800-115776000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr5:115773000-115773400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr5:115773000-115773600 Weak transcription Lung lung
42 chr5:115773000-115774600 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
43 chr5:115773000-115774600 Enhancers Duodenum Mucosa Duodenum
44 chr5:115773000-115774600 Enhancers Small Intestine intestine
45 chr5:115773200-115773400 Bivalent Enhancer H1 Cell Line embryonic stem cell
46 chr5:115773200-115773400 Enhancers Rectal Mucosa Donor 29 rectum
47 chr5:115773200-115773600 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr5:115773200-115774200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr5:115773200-115774200 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr5:115773200-115775000 Bivalent Enhancer HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015