Variant report

Variant	rs12545372
Chromosome Location	chr8:119822573-119822574
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1874034	0.86[CEU][hapmap];0.87[YRI][hapmap];0.87[AMR][1000 genomes]
rs1908220	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1948467	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3133581	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3133585	0.81[EUR][1000 genomes]
rs3134036	0.80[ASN][1000 genomes]
rs3134077	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119816600-119823800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr8:119819800-119823000	Enhancers	Osteobl	bone
3	chr8:119820000-119825200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:119820400-119823200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:119821000-119823600	Weak transcription	NHDF-Ad	bronchial
6	chr8:119821800-119823800	Weak transcription	Hela-S3	cervix
7	chr8:119821800-119824200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr8:119821800-119824200	Weak transcription	NH-A	brain
9	chr8:119822000-119824400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr8:119822000-119824400	Weak transcription	NHLF	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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