The 2.0 version of rSNPBase

Variant report

Variant rs12545590
Chromosome Location chr8:130564040-130564041
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:130556800-130568000 Enhancers Primary monocytes fromperipheralblood blood
2 chr8:130557800-130568600 Genic enhancers K562 blood
3 chr8:130558200-130564200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr8:130558200-130564600 Enhancers Primary B cells from peripheral blood blood
5 chr8:130559200-130564400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr8:130560400-130564600 Genic enhancers Dnd41 blood
7 chr8:130560400-130565400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
8 chr8:130560800-130565000 Enhancers Liver Liver
9 chr8:130561000-130564400 Weak transcription Left Ventricle heart
10 chr8:130561000-130565400 Enhancers Primary hematopoietic stem cells short term culture blood
11 chr8:130561600-130565400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr8:130561600-130565600 Enhancers Thymus Thymus
13 chr8:130561800-130565000 Enhancers Adipose Nuclei Adipose
14 chr8:130562400-130569000 Weak transcription Psoas Muscle Psoas
15 chr8:130562600-130566200 Weak transcription Primary hematopoietic stem cells blood
16 chr8:130563000-130564600 Enhancers A549 lung
17 chr8:130563200-130565400 Enhancers Fetal Heart heart
18 chr8:130563400-130564800 Enhancers iPS-20b Cell Line embryonic stem cell
19 chr8:130563400-130565000 Enhancers Primary neutrophils fromperipheralblood blood
20 chr8:130563400-130565200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr8:130563600-130565000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr8:130563600-130565000 Enhancers Brain Anterior Caudate brain
23 chr8:130563600-130565000 Enhancers Fetal Thymus thymus
24 chr8:130563600-130565400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr8:130563800-130564800 Enhancers Brain Inferior Temporal Lobe brain
26 chr8:130563800-130564800 Enhancers Brain Substantia Nigra brain
27 chr8:130563800-130564800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr8:130563800-130565200 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr8:130564000-130564400 Weak transcription Primary B cells from cord blood blood
30 chr8:130564000-130564600 Enhancers Cortex derived primary cultured neurospheres brain
31 chr8:130564000-130564800 Enhancers Brain Hippocampus Middle brain
32 chr8:130564000-130564800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr8:130564000-130565000 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr8:130564000-130565000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr8:130564000-130565000 Enhancers Brain Angular Gyrus brain
36 chr8:130564000-130565200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr8:130564000-130565200 Enhancers HSMMtube muscle
38 chr8:130564000-130565400 Flanking Active TSS GM12878-XiMat blood
39 chr8:130564000-130565400 Enhancers NH-A brain

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Last update: Aug 31, 2015