Variant report

Variant rs12549003
Chromosome Location chr8:95981278-95981279
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:95964400-96002200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr8:95964600-95992800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr8:95964800-95981800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr8:95964800-95999000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr8:95964800-95999600 Weak transcription Brain Hippocampus Middle brain
6 chr8:95964800-95999600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr8:95965000-95999600 Weak transcription Brain Cingulate Gyrus brain
8 chr8:95966000-95986800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr8:95966000-95993000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr8:95970600-96000800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr8:95971400-95986800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr8:95971400-95987400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr8:95971600-95983800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr8:95971600-95987000 Weak transcription H1 Cell Line embryonic stem cell
15 chr8:95971600-95987000 Weak transcription H9 Cell Line embryonic stem cell
16 chr8:95971600-95987200 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr8:95971600-96000400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr8:95971800-95986800 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr8:95972400-95994800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr8:95972600-95987600 Weak transcription HMEC breast
21 chr8:95973000-95987000 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr8:95973600-95981800 Enhancers Pancreas Pancrea
23 chr8:95974400-96002000 Weak transcription Esophagus oesophagus
24 chr8:95974600-95987000 Weak transcription Thymus Thymus
25 chr8:95976200-95990000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr8:95976600-95993200 Weak transcription Primary T cells from cord blood blood
27 chr8:95976800-95988800 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr8:95977000-95981800 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr8:95977400-95989600 Weak transcription Fetal Stomach stomach
30 chr8:95977400-96024200 Weak transcription Aorta Aorta
31 chr8:95977600-96008800 Weak transcription Brain Germinal Matrix brain
32 chr8:95979000-95982400 Enhancers Liver Liver
33 chr8:95979200-95983800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr8:95979400-95981600 Enhancers Stomach Mucosa stomach
35 chr8:95979400-95982600 Enhancers K562 blood
36 chr8:95979400-95986200 Weak transcription Dnd41 blood
37 chr8:95979600-95982000 Enhancers Primary hematopoietic stem cells blood
38 chr8:95979800-95982400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr8:95979800-95986200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr8:95980200-95981600 Enhancers Small Intestine intestine
41 chr8:95980200-95982000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr8:95980200-95982200 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr8:95980400-95982000 Enhancers HepG2 liver
44 chr8:95980400-95993200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr8:95980600-95981800 Enhancers Duodenum Mucosa Duodenum
46 chr8:95980600-95981800 Strong transcription Fetal Brain Female brain
47 chr8:95980600-95981800 Enhancers Spleen Spleen
48 chr8:95980800-95983000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr8:95980800-95983000 Weak transcription Ovary ovary
50 chr8:95980800-95986800 Weak transcription Lung lung

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