Variant report

Variant	rs12576319
Chromosome Location	chr11:65687242-65687243
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr11:65686693-65687997	A549	lung:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
2	CREB1	chr11:65686066-65687704	HepG2	liver:	n/a	n/a
3	EGR1	chr11:65685178-65687788	HCT-116	colon:	n/a	chr11:65687121-65687136 chr11:65687354-65687367 chr11:65687123-65687133 chr11:65686611-65686625 chr11:65686295-65686305 chr11:65686845-65686860 chr11:65686846-65686859 chr11:65687595-65687608 chr11:65686717-65686730 chr11:65687155-65687165 chr11:65686846-65686859 chr11:65686846-65686860 chr11:65686846-65686859 chr11:65686849-65686859 chr11:65687122-65687135 chr11:65687712-65687722 chr11:65687157-65687170 chr11:65687297-65687311 chr11:65686849-65686858 chr11:65686846-65686859 chr11:65687120-65687130
4	E2F6	chr11:65686699-65687286	H1-hESC	embryonic stem cell:	n/a	chr11:65686839-65686846 chr11:65686726-65686738 chr11:65687156-65687165 chr11:65686839-65686846 chr11:65687121-65687130 chr11:65686836-65686851 chr11:65686839-65686846 chr11:65686722-65686731 chr11:65686854-65686863
5	SP1	chr11:65685425-65687551	HCT-116	colon:	n/a	chr11:65686722-65686731 chr11:65687156-65687165 chr11:65687155-65687164 chr11:65686352-65686366 chr11:65687120-65687130 chr11:65687119-65687131 chr11:65687351-65687361 chr11:65687120-65687129 chr11:65686850-65686862 chr11:65687154-65687166 chr11:65687120-65687129 chr11:65686782-65686793 chr11:65686850-65686862 chr11:65687120-65687134 chr11:65687355-65687369 chr11:65686550-65686562 chr11:65687155-65687169 chr11:65687121-65687130 chr11:65687155-65687165 chr11:65687154-65687166 chr11:65686851-65686860 chr11:65686850-65686861 chr11:65687119-65687131 chr11:65687120-65687130 chr11:65686852-65686861
6	FOSL1	chr11:65686404-65687332	HCT-116	colon:	n/a	chr11:65686725-65686734 chr11:65686894-65686903
7	EGR1	chr11:65685987-65687393	MCF-7	breast:	n/a	chr11:65687121-65687136 chr11:65687354-65687367 chr11:65687123-65687133 chr11:65686611-65686625 chr11:65686295-65686305 chr11:65686845-65686860 chr11:65686846-65686859 chr11:65686717-65686730 chr11:65687155-65687165 chr11:65686846-65686859 chr11:65686846-65686860 chr11:65686846-65686859 chr11:65686849-65686859 chr11:65687122-65687135 chr11:65687157-65687170 chr11:65687297-65687311 chr11:65686849-65686858 chr11:65686846-65686859 chr11:65687120-65687130
8	POLR2A	chr11:65685931-65687274	HUVEC	blood vessel:	n/a	n/a
9	MAZ	chr11:65686262-65687588	GM12878	blood:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
10	MAZ	chr11:65684129-65687972	IMR90	lung:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
11	PBX3	chr11:65687201-65687329	GM12878	blood:	n/a	n/a
12	TCF7L2	chr11:65686476-65687624	HCT-116	colon:	n/a	n/a
13	SP1	chr11:65686019-65687243	A549	lung:	n/a	chr11:65686722-65686731 chr11:65687156-65687165 chr11:65687155-65687164 chr11:65686352-65686366 chr11:65687120-65687130 chr11:65687119-65687131 chr11:65687120-65687129 chr11:65686850-65686862 chr11:65687154-65687166 chr11:65687120-65687129 chr11:65686782-65686793 chr11:65686850-65686862 chr11:65687120-65687134 chr11:65686550-65686562 chr11:65687155-65687169 chr11:65687121-65687130 chr11:65687155-65687165 chr11:65687154-65687166 chr11:65686851-65686860 chr11:65686850-65686861 chr11:65687119-65687131 chr11:65687120-65687130 chr11:65686852-65686861
14	EGR1	chr11:65685968-65687561	K562	blood:	n/a	chr11:65687121-65687136 chr11:65687354-65687367 chr11:65687123-65687133 chr11:65686611-65686625 chr11:65686295-65686305 chr11:65686845-65686860 chr11:65686846-65686859 chr11:65686717-65686730 chr11:65687155-65687165 chr11:65686846-65686859 chr11:65686846-65686860 chr11:65686846-65686859 chr11:65686849-65686859 chr11:65687122-65687135 chr11:65687157-65687170 chr11:65687297-65687311 chr11:65686849-65686858 chr11:65686846-65686859 chr11:65687120-65687130
15	SP1	chr11:65686327-65687363	A549	lung:	n/a	chr11:65686722-65686731 chr11:65687156-65687165 chr11:65687155-65687164 chr11:65686352-65686366 chr11:65687120-65687130 chr11:65687119-65687131 chr11:65687351-65687361 chr11:65687120-65687129 chr11:65686850-65686862 chr11:65687154-65687166 chr11:65687120-65687129 chr11:65686782-65686793 chr11:65686850-65686862 chr11:65687120-65687134 chr11:65686550-65686562 chr11:65687155-65687169 chr11:65687121-65687130 chr11:65687155-65687165 chr11:65687154-65687166 chr11:65686851-65686860 chr11:65686850-65686861 chr11:65687119-65687131 chr11:65687120-65687130 chr11:65686852-65686861
16	MAX	chr11:65685758-65687963	MCF-7	breast:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
17	MAX	chr11:65686497-65687582	GM12878	blood:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
18	TAF1	chr11:65685967-65687399	ECC-1	luminal epithelium:	n/a	n/a
19	EGR1	chr11:65687167-65687496	K562	blood:	n/a	chr11:65687354-65687367 chr11:65687297-65687311
20	HCFC1	chr11:65685563-65688075	Hela-S3	cervix:	n/a	n/a
21	ZEB1	chr11:65687203-65687617	GM12878	blood:	n/a	n/a
22	POLR2A	chr11:65686653-65687347	HCT-116	colon:	n/a	n/a
23	POLR2A	chr11:65681960-65688394	PANC-1	pancreas:	n/a	n/a
24	SIN3AK20	chr11:65686460-65687544	MCF-7	breast:	n/a	n/a
25	TCF3	chr11:65687193-65687697	GM12878	blood:	n/a	n/a
26	POLR2A	chr11:65686225-65687653	H1-neurons	neurons:	n/a	n/a
27	YY1	chr11:65685865-65687372	K562	blood:	n/a	chr11:65686848-65686857 chr11:65686494-65686506 chr11:65686300-65686309 chr11:65686304-65686314 chr11:65686723-65686734 chr11:65687156-65687165 chr11:65687121-65687130 chr11:65686926-65686940 chr11:65686350-65686361 chr11:65686295-65686309 chr11:65686932-65686941
28	MAZ	chr11:65686224-65687464	K562	blood:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
29	MYC	chr11:65685934-65687393	NB4	blood:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
30	PML	chr11:65685919-65687490	GM12878	blood:	n/a	n/a
31	ELF1	chr11:65685845-65688085	GM12878	blood:	n/a	chr11:65686336-65686348 chr11:65686030-65686042 chr11:65686555-65686567 chr11:65686562-65686574 chr11:65686932-65686941
32	ZBTB7A	chr11:65686995-65687735	ECC-1	luminal epithelium:	n/a	n/a
33	POLR2A	chr11:65687158-65687361	Hela-S3	cervix:	n/a	n/a
34	MXI1	chr11:65685333-65688811	IMR90	lung:	n/a	n/a
35	POLR2A	chr11:65685955-65687681	MCF-7	breast:	n/a	n/a
36	CHD2	chr11:65686226-65687255	Hela-S3	cervix:	n/a	chr11:65687119-65687129
37	E2F6	chr11:65686681-65687251	H1-hESC	embryonic stem cell:	n/a	chr11:65686839-65686846 chr11:65686726-65686738 chr11:65687156-65687165 chr11:65686839-65686846 chr11:65687121-65687130 chr11:65686836-65686851 chr11:65686839-65686846 chr11:65686722-65686731 chr11:65686854-65686863
38	POLR2A	chr11:65686664-65687450	K562	blood:	n/a	n/a
39	MAX	chr11:65684998-65688252	A549	lung:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
40	RCOR1	chr11:65685260-65688557	IMR90	lung:	n/a	n/a
41	MAX	chr11:65686351-65687414	SK-N-SH	brain:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028
42	FOSL1	chr11:65686401-65687440	H1-hESC	embryonic stem cell:	n/a	chr11:65686725-65686734 chr11:65686894-65686903
43	POLR2A	chr11:65681389-65688769	PANC-1	pancreas:	n/a	n/a
44	IRF1	chr11:65686461-65687329	K562	blood:	n/a	chr11:65686850-65686864 chr11:65687117-65687131
45	TCF12	chr11:65685884-65687263	ECC-1	luminal epithelium:	n/a	n/a
46	ZBTB7A	chr11:65686672-65687540	K562	blood:	n/a	n/a
47	HDAC2	chr11:65687130-65687460	K562	blood:	n/a	n/a
48	POLR2A	chr11:65686676-65687882	GM12878	blood:	n/a	n/a
49	CREB1	chr11:65686270-65687564	GM12878	blood:	n/a	n/a
50	MAX	chr11:65686221-65687742	HepG2	liver:	n/a	chr11:65687019-65687026 chr11:65687018-65687027 chr11:65687018-65687028 chr11:65687016-65687029 chr11:65687017-65687028 chr11:65687367-65687377 chr11:65687018-65687027 chr11:65687017-65687028 chr11:65687017-65687027 chr11:65687016-65687026 chr11:65687354-65687363 chr11:65687122-65687132 chr11:65687017-65687028

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:65687220-65687270	Caco-2	colon:	n/a
2	chr11:65687220-65687270	NT2-D1	testis:	n/a
3	chr11:65687220-65687270	SAEC	small airway:	n/a
4	chr11:65687220-65687270	GM06990	blood:	n/a
5	chr11:65687220-65687270	GM12892	blood:	n/a
6	chr11:65687220-65687270	HRCEpiC	kidney:	n/a
7	chr11:65687220-65687270	HEK293	kidney:	embryo
8	chr11:65687220-65687270	AoSMC	blood vessel:	n/a
9	chr11:65687220-65687270	HCM	heart:	n/a
10	chr11:65687220-65687270	NB4	blood:	n/a
11	chr11:65687220-65687270	NHBE	bronchial:	n/a
12	chr11:65687220-65687270	HRE	kidney:	n/a
13	chr11:65687220-65687270	GM19239	blood:	n/a
14	chr11:65687220-65687270	IMR90	lung:	fetal
15	chr11:65687220-65687270	LNCaP	prostate:	n/a
16	chr11:65687220-65687270	A549	lung:	n/a
17	chr11:65687220-65687270	H1-hESC	embryonic stem cell:	embryo
18	chr11:65687220-65687270	GM12878	blood:	n/a
19	chr11:65687220-65687270	SKMC	muscle:	n/a
20	chr11:65687220-65687270	HUVEC	blood vessel:	n/a
21	chr11:65687220-65687270	AG10803	skin:	n/a
22	chr11:65687220-65687270	CMK	blood:	n/a
23	chr11:65687220-65687270	AG09309	skin:	n/a
24	chr11:65687220-65687270	BJ	skin:	n/a
25	chr11:65687220-65687270	HIPEpiC	eye:	n/a
26	chr11:65687220-65687270	HEEpiC	esophagus:	n/a
27	chr11:65687220-65687270	SK-N-SH	brain:	n/a
28	chr11:65687220-65687270	MCF-7	breast:	n/a
29	chr11:65687220-65687270	HPAEpiC	pulmonary alveolar:	n/a
30	chr11:65687220-65687270	U87	brain:	n/a
31	chr11:65687220-65687270	RPTEC	kidney:	n/a
32	chr11:65687220-65687270	PANC-1	pancreas:	n/a
33	chr11:65687220-65687270	SK-N-MC	brain:	n/a
34	chr11:65687220-65687270	HCPEpiC	choroid plexus:	n/a
35	chr11:65687220-65687270	BE2_C	brain:	n/a
36	chr11:65687220-65687270	Hepatocyte	liver:	n/a
37	chr11:65687220-65687270	PFSK-1	brain:	n/a
38	chr11:65687220-65687270	HNPCEpiC	eye:	n/a
39	chr11:65687220-65687270	AG04449	skin:	fetal
40	chr11:65687220-65687270	HRPEpiC	eye:	n/a
41	chr11:65687220-65687270	Jurkat	blood:	n/a
42	chr11:65687220-65687270	NHDF-neo	bronchial:	n/a
43	chr11:65687220-65687270	PrEC	prostate:	n/a
44	chr11:65687220-65687270	Hela-S3	cervix:	n/a
45	chr11:65687220-65687270	T-47D	breast:	n/a
46	chr11:65687220-65687270	HAEpiC	amniotic membrane:	n/a
47	chr11:65687220-65687270	ProgFib	skin:	n/a
48	chr11:65687220-65687270	AG09319	gingival:	n/a
49	chr11:65687220-65687270	ovcar-3	ovarian:	n/a
50	chr11:65687220-65687270	SK-N-SH_RA	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:65686637..65688948-chr11:65818033..65819758,2	MCF-7	breast:
2	chr11:65686028..65688370-chr14:24657521..24659456,2	MCF-7	breast:
3	chr11:65685704..65687769-chr16:2199138..2200731,2	MCF-7	breast:
4	chr11:65686358..65687859-chr13:91999900..92001660,2	K562	blood:
5	chr11:65430177..65431911-chr11:65686267..65688055,2	K562	blood:
6	chr11:65683165..65691632-chr11:65723620..65730701,28	MCF-7	breast:
7	chr11:65650935..65653549-chr11:65685284..65687414,2	MCF-7	breast:
8	chr11:65383137..65385926-chr11:65685879..65687522,2	MCF-7	breast:
9	chr11:65342886..65345023-chr11:65685103..65687892,2	MCF-7	breast:
10	chr11:65686026..65690385-chr11:65711034..65716101,7	MCF-7	breast:
11	chr11:65640551..65642134-chr11:65685115..65687811,2	MCF-7	breast:
12	chr11:65685063..65688035-chr11:65836071..65837888,2	MCF-7	breast:
13	chr11:65684149..65688321-chr11:65727274..65731998,8	MCF-7	breast:
14	chr11:65624095..65629782-chr11:65682347..65689302,13	MCF-7	breast:
15	chr11:65685854..65687838-chr13:92002138..92004111,2	K562	blood:
16	chr11:65650579..65663306-chr11:65677153..65690311,39	MCF-7	breast:
17	chr11:65622510..65630779-chr11:65675126..65689187,23	MCF-7	breast:
18	chr11:65478095..65481080-chr11:65686637..65690416,3	MCF-7	breast:
19	chr11:65488196..65490800-chr11:65684778..65687737,2	MCF-7	breast:
20	chr11:65552272..65555849-chr11:65684886..65688039,3	MCF-7	breast:

Variant related genes	Relation type
C11orf68	TF binding region
DRAP1	TF binding region
C11orf68	CpG island
DRAP1	CpG island
ENSG00000167964	Chromatin interaction
ENSG00000196497	Chromatin interaction
ENSG00000215417	Chromatin interaction
ENSG00000173442	Chromatin interaction
ENSG00000172818	Chromatin interaction
ENSG00000255038	Chromatin interaction
ENSG00000175467	Chromatin interaction
ENSG00000172977	Chromatin interaction
ENSG00000175513	Chromatin interaction
ENSG00000173039	Chromatin interaction
ENSG00000175602	Chromatin interaction
ENSG00000172732	Chromatin interaction
ENSG00000087365	Chromatin interaction
ENSG00000172638	Chromatin interaction
ENSG00000172922	Chromatin interaction
ENSG00000172500	Chromatin interaction
ENSG00000172757	Chromatin interaction
ENSG00000197136	Chromatin interaction
ENSG00000175115	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10791831	1.00[ASN][1000 genomes]
rs10896065	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs11227338	0.96[ASN][1000 genomes]
rs11542177	1.00[ASN][1000 genomes]
rs12099125	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12099359	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12574568	1.00[JPT][hapmap]
rs12575514	0.81[ASN][1000 genomes]
rs12575735	1.00[JPT][hapmap]
rs12576224	0.94[ASN][1000 genomes]
rs12577625	0.81[ASN][1000 genomes]
rs2241304	1.00[JPT][hapmap]
rs2276015	0.88[CHD][hapmap];1.00[JPT][hapmap]
rs28372938	0.85[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs3825068	0.89[CHD][hapmap];1.00[JPT][hapmap]
rs4930169	0.89[JPT][hapmap]
rs58192075	1.00[ASN][1000 genomes]
rs58905199	0.81[ASN][1000 genomes]
rs61515492	0.86[ASN][1000 genomes]
rs653955	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs67232706	0.83[ASN][1000 genomes]
rs67530871	0.83[ASN][1000 genomes]
rs72928828	0.81[ASN][1000 genomes]
rs72928830	0.81[ASN][1000 genomes]
rs73496412	1.00[ASN][1000 genomes]
rs73496423	0.97[ASN][1000 genomes]
rs73496424	1.00[ASN][1000 genomes]
rs73496435	1.00[ASN][1000 genomes]
rs7927841	0.89[ASN][1000 genomes]
rs7940700	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7941052	0.94[ASN][1000 genomes]
rs9326357	0.84[ASN][1000 genomes]
rs9326362	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9919533	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430401	chr11:65419324-65788024	Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	224 gene(s)	inside rSNPs	diseases
2	esv2758274	chr11:65559893-65722363	Genic enhancers Active TSS Flanking Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
3	esv2759834	chr11:65559893-65722363	Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
4	nsv427890	chr11:65559893-65722363	Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
5	nsv897761	chr11:65580638-65738566	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	186 gene(s)	inside rSNPs	diseases
6	nsv897762	chr11:65613218-65758854	Active TSS Flanking Active TSS Genic enhancers Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	185 gene(s)	inside rSNPs	diseases
7	nsv897764	chr11:65613348-65695222	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv897765	chr11:65623708-65758854	Strong transcription Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
9	nsv832191	chr11:65632329-65806120	Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
10	nsv897767	chr11:65683531-65690206	Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
11	esv3325633	chr11:65685401-65688349	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	30 gene(s)	inside rSNPs	diseases
12	esv3406227	chr11:65685726-65687774	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island Chromatin interactive region	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65685200-65688000	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr11:65685400-65688000	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr11:65685400-65688000	Active TSS	Aorta	Aorta
4	chr11:65685400-65688400	Active TSS	iPS-18 Cell Line	embryonic stem cell
5	chr11:65685600-65687600	Active TSS	Ovary	ovary
6	chr11:65685600-65687600	Active TSS	Psoas Muscle	Psoas
7	chr11:65685600-65687800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr11:65685600-65687800	Active TSS	Small Intestine	intestine
9	chr11:65685600-65688000	Active TSS	H9 Cell Line	embryonic stem cell
10	chr11:65685600-65688200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr11:65685600-65688200	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr11:65685800-65687400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr11:65685800-65687400	Active TSS	Brain Angular Gyrus	brain
14	chr11:65685800-65687400	Active TSS	Brain Cingulate Gyrus	brain
15	chr11:65685800-65687400	Active TSS	Brain Inferior Temporal Lobe	brain
16	chr11:65685800-65687400	Active TSS	Brain Substantia Nigra	brain
17	chr11:65685800-65687400	Active TSS	Fetal Stomach	stomach
18	chr11:65685800-65687400	Active TSS	Right Ventricle	heart
19	chr11:65685800-65687600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
20	chr11:65685800-65687600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr11:65685800-65687600	Active TSS	Brain Hippocampus Middle	brain
22	chr11:65685800-65687600	Active TSS	Esophagus	oesophagus
23	chr11:65685800-65687600	Active TSS	Fetal Brain Female	brain
24	chr11:65685800-65687600	Active TSS	Fetal Intestine Large	intestine
25	chr11:65685800-65687600	Active TSS	Fetal Lung	lung
26	chr11:65685800-65687600	Active TSS	Placenta Amnion	Placenta Amnion
27	chr11:65685800-65687600	Active TSS	Thymus	Thymus
28	chr11:65685800-65687600	Active TSS	A549	lung
29	chr11:65685800-65687800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr11:65685800-65687800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr11:65685800-65687800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr11:65685800-65687800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr11:65685800-65687800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr11:65685800-65687800	Active TSS	Colon Smooth Muscle	Colon
35	chr11:65685800-65687800	Active TSS	Gastric	stomach
36	chr11:65685800-65687800	Active TSS	Left Ventricle	heart
37	chr11:65685800-65687800	Active TSS	Lung	lung
38	chr11:65685800-65687800	Active TSS	Sigmoid Colon	Sigmoid Colon
39	chr11:65685800-65687800	Active TSS	HSMM	muscle
40	chr11:65685800-65687800	Active TSS	NHLF	lung
41	chr11:65685800-65688000	Active TSS	Breast Myoepithelial Primary Cells	Breast
42	chr11:65685800-65688000	Active TSS	Fetal Kidney	kidney
43	chr11:65685800-65688000	Active TSS	NHDF-Ad	bronchial
44	chr11:65685800-65688200	Active TSS	HUES6 Cell Line	embryonic stem cell
45	chr11:65685800-65688200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr11:65686000-65687400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr11:65686000-65687400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr11:65686000-65687400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
49	chr11:65686000-65687400	Active TSS	Primary T cells from cord blood	blood
50	chr11:65686000-65687400	Active TSS	Primary T helper cells PMA-I stimulated	--

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