The 2.0 version of rSNPBase

Variant report

Variant rs12577458
Chromosome Location chr11:8411130-8411131
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8407600-8411600 Enhancers Fetal Adrenal Gland Adrenal Gland
2 chr11:8407600-8414200 Enhancers Fetal Heart heart
3 chr11:8408200-8415600 Enhancers Fetal Lung lung
4 chr11:8409400-8411200 Enhancers Fetal Thymus thymus
5 chr11:8409800-8411400 Enhancers Fetal Brain Male brain
6 chr11:8409800-8412200 Enhancers Fetal Stomach stomach
7 chr11:8410200-8411200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr11:8410200-8411200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr11:8410200-8411600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr11:8410200-8411600 Enhancers Fetal Muscle Trunk muscle
11 chr11:8410200-8412000 Enhancers Cortex derived primary cultured neurospheres brain
12 chr11:8410400-8411200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr11:8410400-8411200 Flanking Active TSS Stomach Smooth Muscle stomach
14 chr11:8410400-8411400 Enhancers Left Ventricle heart
15 chr11:8410400-8411600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr11:8410400-8411800 Enhancers Rectal Smooth Muscle rectum
17 chr11:8410400-8412000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:8410400-8412000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr11:8410400-8412000 Enhancers Brain Germinal Matrix brain
20 chr11:8410600-8411200 Flanking Active TSS Brain Anterior Caudate brain
21 chr11:8410600-8411200 Enhancers Fetal Brain Female brain
22 chr11:8410600-8411200 Enhancers Right Ventricle heart
23 chr11:8410600-8411400 Flanking Active TSS Brain Substantia Nigra brain
24 chr11:8410600-8411600 Enhancers HUES6 Cell Line embryonic stem cell
25 chr11:8410600-8411600 Flanking Active TSS Brain Cingulate Gyrus brain
26 chr11:8410600-8411800 Enhancers ES-I3 Cell Line embryonic stem cell
27 chr11:8410600-8411800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr11:8410600-8411800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr11:8410600-8412000 Flanking Active TSS Brain Hippocampus Middle brain
30 chr11:8410600-8412000 Enhancers Fetal Muscle Leg muscle
31 chr11:8410600-8412000 Enhancers Lung lung
32 chr11:8410800-8411200 Enhancers H1 Cell Line embryonic stem cell
33 chr11:8410800-8411200 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr11:8410800-8411200 Enhancers Stomach Mucosa stomach
35 chr11:8410800-8411200 Enhancers HSMMtube muscle
36 chr11:8410800-8411400 Active TSS Skeletal Muscle Female skeletal muscle
37 chr11:8410800-8411400 Enhancers NH-A brain
38 chr11:8410800-8411600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr11:8410800-8411600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:8410800-8411600 Enhancers Skeletal Muscle Male skeletal muscle
41 chr11:8410800-8411600 Enhancers NHEK skin
42 chr11:8410800-8411800 Enhancers HUES64 Cell Line embryonic stem cell
43 chr11:8410800-8412000 Enhancers HUES48 Cell Line embryonic stem cell
44 chr11:8410800-8412200 Enhancers Fetal Kidney kidney
45 chr11:8411000-8411200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr11:8411000-8411200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr11:8411000-8411400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr11:8411000-8411400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
49 chr11:8411000-8411400 Active TSS Brain Inferior Temporal Lobe brain
50 chr11:8411000-8411400 Flanking Active TSS Colon Smooth Muscle Colon

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Last update: Aug 31, 2015