Variant report

Variant	rs12582182
Chromosome Location	chr12:121884118-121884119
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:121883486..121886265-chr12:121890331..121891870,2	MCF-7	breast:
2	chr12:121871998..121875196-chr12:121881488..121886297,4	K562	blood:
3	chr12:121880833..121882674-chr12:121883238..121886175,2	MCF-7	breast:
4	chr12:121872793..121874717-chr12:121882378..121884801,2	K562	blood:
5	chr12:121788278..121791610-chr12:121879889..121884323,6	MCF-7	breast:
6	chr12:121881584..121884550-chr12:121902935..121904495,2	MCF-7	breast:
7	chr12:121878996..121881919-chr12:121883454..121886452,4	K562	blood:

No data

Variant related genes	Relation type
ENSG00000089094	Chromatin interaction
ENSG00000089053	Chromatin interaction

rs_ID	r²[population]
rs10849886	0.85[AMR][1000 genomes]
rs12579582	0.81[AMR][1000 genomes]
rs3817544	0.80[ASN][1000 genomes]
rs3817545	0.80[ASN][1000 genomes]
rs3817546	0.80[ASN][1000 genomes]
rs3817549	0.80[ASN][1000 genomes]
rs3817551	0.80[ASN][1000 genomes]
rs7980819	0.81[AMR][1000 genomes]

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121850400-121887400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr12:121851800-121891400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr12:121852200-121884800	Strong transcription	Primary T cells from cord blood	blood
4	chr12:121853000-121884800	Strong transcription	HUES48 Cell Line	embryonic stem cell
5	chr12:121861400-121903600	Weak transcription	Right Atrium	heart
6	chr12:121864000-121889200	Strong transcription	Fetal Intestine Small	intestine
7	chr12:121864600-121887200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr12:121867600-121890000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr12:121868000-121893600	Weak transcription	Psoas Muscle	Psoas
10	chr12:121869600-121886400	Weak transcription	Fetal Heart	heart
11	chr12:121873600-121884400	Strong transcription	Primary T helper cells fromperipheralblood	blood
12	chr12:121874000-121889600	Weak transcription	HMEC	breast
13	chr12:121875000-121884800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr12:121875000-121886800	Weak transcription	Fetal Brain Male	brain
15	chr12:121875200-121885000	Strong transcription	Monocytes-CD14+_RO01746	blood
16	chr12:121875200-121889800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr12:121875200-121889800	Weak transcription	HUVEC	blood vessel
18	chr12:121875400-121884400	Strong transcription	Fetal Brain Female	brain
19	chr12:121875600-121884400	Strong transcription	Dnd41	blood
20	chr12:121875600-121889200	Strong transcription	Fetal Thymus	thymus
21	chr12:121876400-121884400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr12:121876800-121887400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
23	chr12:121877800-121889800	Weak transcription	NHDF-Ad	bronchial
24	chr12:121878200-121886400	Weak transcription	HSMM	muscle
25	chr12:121878600-121888800	Weak transcription	K562	blood
26	chr12:121878600-121889000	Weak transcription	Fetal Kidney	kidney
27	chr12:121879000-121885400	Weak transcription	NH-A	brain
28	chr12:121879200-121892400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
29	chr12:121879200-121898600	Weak transcription	HSMMtube	muscle
30	chr12:121879200-121903400	Weak transcription	Hela-S3	cervix
31	chr12:121879200-121904000	Weak transcription	Small Intestine	intestine
32	chr12:121879400-121888000	Weak transcription	Primary neutrophils fromperipheralblood	blood
33	chr12:121879800-121889600	Weak transcription	Osteobl	bone
34	chr12:121879800-121889800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
35	chr12:121880000-121889400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr12:121880000-121903600	Weak transcription	Muscle Satellite Cultured Cells	--
37	chr12:121880000-121904000	Weak transcription	Aorta	Aorta
38	chr12:121880200-121889200	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr12:121880600-121886600	Weak transcription	Left Ventricle	heart
40	chr12:121880600-121889800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr12:121880800-121884200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr12:121880800-121885200	Weak transcription	Ovary	ovary
43	chr12:121880800-121889800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
44	chr12:121880800-121902800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr12:121881000-121889800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr12:121881200-121887000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr12:121881600-121885200	Strong transcription	Primary T cells fromperipheralblood	blood
48	chr12:121881800-121903400	Weak transcription	A549	lung
49	chr12:121882000-121884200	Strong transcription	Fetal Stomach	stomach
50	chr12:121882000-121884600	Strong transcription	Primary B cells from cord blood	blood

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