Variant report

Variant rs12593998
Chromosome Location chr15:51058629-51058630
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51058000-51059000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
2 chr15:51058000-51059000 Flanking Active TSS Stomach Smooth Muscle stomach
3 chr15:51058200-51059000 Enhancers Lung lung
4 chr15:51058200-51059000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
5 chr15:51058400-51058800 Enhancers Primary T cells fromperipheralblood blood
6 chr15:51058400-51058800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr15:51058400-51058800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
8 chr15:51058400-51058800 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr15:51058400-51058800 Enhancers Placenta Placenta
10 chr15:51058400-51058800 Enhancers Sigmoid Colon Sigmoid Colon
11 chr15:51058400-51058800 Enhancers A549 lung
12 chr15:51058400-51059000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr15:51058400-51059000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr15:51058400-51059000 Enhancers Colonic Mucosa Colon
15 chr15:51058400-51059000 Enhancers Fetal Intestine Small intestine
16 chr15:51058400-51059000 Enhancers Left Ventricle heart
17 chr15:51058400-51059000 Enhancers Pancreas Pancrea
18 chr15:51058400-51059000 Enhancers Right Ventricle heart
19 chr15:51058400-51059200 Active TSS HepG2 liver
20 chr15:51058400-51059400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr15:51058400-51059400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr15:51058400-51059400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr15:51058400-51059400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr15:51058400-51059400 Enhancers Fetal Heart heart
25 chr15:51058400-51059400 Weak transcription Osteobl bone
26 chr15:51058400-51059600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr15:51058400-51059600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr15:51058400-51059600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr15:51058400-51059600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr15:51058400-51059800 Weak transcription Aorta Aorta
31 chr15:51058400-51059800 Weak transcription Esophagus oesophagus
32 chr15:51058400-51059800 Enhancers Stomach Mucosa stomach
33 chr15:51058400-51059800 Weak transcription NHEK skin
34 chr15:51058400-51059800 Weak transcription NHLF lung
35 chr15:51058400-51060000 Weak transcription Right Atrium heart
36 chr15:51058400-51060400 Enhancers GM12878-XiMat blood
37 chr15:51058400-51061000 Weak transcription NHDF-Ad bronchial
38 chr15:51058400-51066800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr15:51058600-51058800 Enhancers Primary T helper cells PMA-I stimulated --
40 chr15:51058600-51058800 Active TSS Primary T helper cells fromperipheralblood blood
41 chr15:51058600-51058800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr15:51058600-51058800 Active TSS Rectal Mucosa Donor 31 rectum
43 chr15:51058600-51059000 Enhancers Fetal Muscle Trunk muscle
44 chr15:51058600-51059000 Enhancers Psoas Muscle Psoas
45 chr15:51058600-51059400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr15:51058600-51059400 Active TSS Rectal Mucosa Donor 29 rectum
47 chr15:51058600-51059600 Weak transcription Adipose Nuclei Adipose
48 chr15:51058600-51059600 Weak transcription Small Intestine intestine
49 chr15:51058600-51059600 Weak transcription Hela-S3 cervix
50 chr15:51058600-51059600 Weak transcription HMEC breast

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