Variant report

Variant rs12594823
Chromosome Location chr15:78315497-78315498
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78287000-78316000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr15:78296200-78316400 Weak transcription H1 Cell Line embryonic stem cell
3 chr15:78296200-78358200 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr15:78300600-78316400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr15:78301000-78316400 Weak transcription Psoas Muscle Psoas
6 chr15:78301200-78315800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr15:78301400-78342200 Weak transcription HMEC breast
8 chr15:78303200-78342400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr15:78305400-78317600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr15:78305400-78329800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr15:78305600-78315600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr15:78305600-78325800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr15:78307200-78342000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr15:78308800-78315600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr15:78308800-78315800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr15:78308800-78327200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:78309000-78315800 Weak transcription Brain Substantia Nigra brain
18 chr15:78309000-78316400 Weak transcription H9 Cell Line embryonic stem cell
19 chr15:78309000-78316400 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr15:78309000-78317200 Weak transcription Small Intestine intestine
21 chr15:78309200-78330200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr15:78309200-78330800 Weak transcription A549 lung
23 chr15:78309200-78354200 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr15:78309400-78321800 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr15:78309600-78315600 Weak transcription Rectal Smooth Muscle rectum
26 chr15:78309800-78316600 Weak transcription NH-A brain
27 chr15:78311200-78322600 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr15:78311400-78315800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr15:78311400-78316000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr15:78311800-78315800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr15:78311800-78315800 Strong transcription Fetal Intestine Small intestine
32 chr15:78311800-78315800 Weak transcription Right Atrium heart
33 chr15:78311800-78316000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr15:78311800-78322400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr15:78311800-78323400 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr15:78311800-78326800 Weak transcription K562 blood
37 chr15:78312000-78323000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr15:78312200-78315600 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr15:78312200-78317000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr15:78312200-78317800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:78312200-78317800 Strong transcription Brain Inferior Temporal Lobe brain
42 chr15:78312200-78322800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr15:78312200-78323200 Strong transcription Fetal Intestine Large intestine
44 chr15:78312400-78315600 Strong transcription Rectal Mucosa Donor 31 rectum
45 chr15:78312400-78315800 Strong transcription Gastric stomach
46 chr15:78312400-78316000 Strong transcription Primary monocytes fromperipheralblood blood
47 chr15:78312400-78316200 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr15:78312400-78316600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr15:78312400-78317800 Strong transcription Brain Angular Gyrus brain
50 chr15:78312400-78322200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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