Variant report

Variant rs12596796
Chromosome Location chr16:75522322-75522323
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75507000-75525600 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr16:75512600-75525600 Weak transcription Brain Angular Gyrus brain
3 chr16:75513600-75523400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr16:75514000-75522800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr16:75514000-75523400 Weak transcription Brain Cingulate Gyrus brain
6 chr16:75514000-75524800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr16:75514000-75525400 Weak transcription Brain Hippocampus Middle brain
8 chr16:75514000-75528000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr16:75514000-75528200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr16:75514200-75522800 Weak transcription Brain Substantia Nigra brain
11 chr16:75514200-75525600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr16:75517200-75526000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr16:75517400-75522800 Weak transcription Brain Anterior Caudate brain
14 chr16:75520200-75525600 Weak transcription Hela-S3 cervix
15 chr16:75520200-75525800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr16:75520400-75525600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr16:75520400-75528200 Weak transcription H9 Cell Line embryonic stem cell
18 chr16:75521000-75525800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr16:75521000-75527600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr16:75521200-75522400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr16:75521200-75522400 Weak transcription HepG2 liver
22 chr16:75521200-75525600 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr16:75521200-75525600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr16:75521200-75525600 Weak transcription HMEC breast
25 chr16:75521200-75525800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr16:75521200-75526000 Weak transcription NHEK skin
27 chr16:75521200-75527000 Enhancers GM12878-XiMat blood
28 chr16:75521200-75528200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr16:75521400-75525800 Weak transcription H1 Cell Line embryonic stem cell
30 chr16:75521400-75525800 Weak transcription Placenta Placenta
31 chr16:75521800-75524000 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr16:75522000-75527600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr16:75522200-75525800 Weak transcription HUES64 Cell Line embryonic stem cell

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