Variant report
| Variant | rs12600604 |
|---|---|
| Chromosome Location | chr17:20881961-20881962 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:20848200-20896600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr17:20852800-20882600 | Weak transcription | K562 | blood |
| 3 | chr17:20862600-20890800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr17:20866000-20886600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr17:20868000-20884800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr17:20870000-20883000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 7 | chr17:20871800-20886800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 8 | chr17:20873200-20886400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 9 | chr17:20873200-20890200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr17:20874600-20896600 | Weak transcription | Spleen | Spleen |
| 11 | chr17:20879800-20882800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 12 | chr17:20879800-20883000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr17:20879800-20883000 | Weak transcription | NHEK | skin |
| 14 | chr17:20880400-20882600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 15 | chr17:20880400-20882800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr17:20881200-20882000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr17:20881200-20883400 | Enhancers | Pancreas | Pancrea |
| 18 | chr17:20881400-20882800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr17:20881400-20883200 | Weak transcription | HepG2 | liver |
| 20 | chr17:20881400-20896200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 21 | chr17:20881800-20882200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 22 | chr17:20881800-20882600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
