Variant report

Variant rs1993901
Chromosome Location chr17:20938791-20938792
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20903400-20940000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:20923000-20943800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr17:20931800-20940200 Enhancers Brain Cingulate Gyrus brain
4 chr17:20932200-20941400 Genic enhancers A549 lung
5 chr17:20932600-20940400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr17:20932800-20941800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr17:20933400-20938800 Strong transcription Hela-S3 cervix
8 chr17:20934000-20942800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr17:20934000-20943200 Weak transcription Esophagus oesophagus
10 chr17:20934600-20940000 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr17:20935000-20938800 Enhancers Spleen Spleen
12 chr17:20935000-20940600 Enhancers Left Ventricle heart
13 chr17:20935000-20941000 Enhancers Right Ventricle heart
14 chr17:20935200-20943800 Enhancers Cortex derived primary cultured neurospheres brain
15 chr17:20935400-20938800 Enhancers Brain Germinal Matrix brain
16 chr17:20935400-20939000 Enhancers Placenta Amnion Placenta Amnion
17 chr17:20935400-20939200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
18 chr17:20935600-20940000 Enhancers Brain Inferior Temporal Lobe brain
19 chr17:20935600-20940200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:20935600-20942200 Enhancers Fetal Brain Male brain
21 chr17:20935800-20939000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr17:20935800-20939400 Enhancers Fetal Lung lung
23 chr17:20935800-20940600 Enhancers Fetal Heart heart
24 chr17:20936000-20939600 Enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr17:20936200-20941600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr17:20936400-20939600 Enhancers K562 blood
27 chr17:20936400-20939800 Enhancers Rectal Mucosa Donor 31 rectum
28 chr17:20936400-20940800 Enhancers Primary neutrophils fromperipheralblood blood
29 chr17:20936600-20941000 Enhancers Primary monocytes fromperipheralblood blood
30 chr17:20936600-20941200 Genic enhancers HUVEC blood vessel
31 chr17:20936800-20939400 Genic enhancers HUES6 Cell Line embryonic stem cell
32 chr17:20936800-20939800 Enhancers HepG2 liver
33 chr17:20936800-20941800 Genic enhancers NHEK skin
34 chr17:20936800-20942000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr17:20936800-20943800 Enhancers Liver Liver
36 chr17:20937000-20938800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr17:20937000-20939600 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr17:20937000-20940200 Enhancers Sigmoid Colon Sigmoid Colon
39 chr17:20937200-20938800 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr17:20937400-20938800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr17:20937400-20938800 Flanking Active TSS Primary B cells from cord blood blood
42 chr17:20937400-20938800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
43 chr17:20937400-20938800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr17:20937400-20938800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr17:20937400-20939000 Flanking Active TSS Primary T cells from cord blood blood
46 chr17:20937400-20939000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
47 chr17:20937400-20939000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr17:20937400-20939000 Enhancers Pancreatic Islets Pancreatic Islet
49 chr17:20937400-20939000 Enhancers Stomach Mucosa stomach
50 chr17:20937400-20939200 Flanking Active TSS GM12878-XiMat blood

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