Variant report
Variant | rs12612581 |
---|---|
Chromosome Location | chr2:125459227-125459228 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10084437 | 0.82[CHB][hapmap] |
rs10166480 | 0.82[CHB][hapmap] |
rs10178842 | 0.82[CHB][hapmap] |
rs10179213 | 0.82[CHB][hapmap] |
rs10183674 | 0.82[CHB][hapmap] |
rs10184800 | 0.82[CHB][hapmap] |
rs10185492 | 0.82[CHB][hapmap] |
rs10208814 | 0.82[CHB][hapmap] |
rs11123062 | 0.82[CHB][hapmap] |
rs11680115 | 0.82[CHB][hapmap] |
rs11684422 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12468133 | 0.82[CHB][hapmap] |
rs12469969 | 0.82[CHB][hapmap] |
rs12623831 | 0.82[CHB][hapmap] |
rs13003204 | 0.82[CHB][hapmap] |
rs13021629 | 1.00[CHB][hapmap] |
rs13396871 | 0.82[CHB][hapmap] |
rs13400133 | 0.82[CHB][hapmap] |
rs13409512 | 0.82[CHB][hapmap] |
rs13427244 | 0.82[CHB][hapmap] |
rs1586081 | 0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs17393599 | 0.82[CHB][hapmap] |
rs4848259 | 0.82[CHB][hapmap] |
rs62171305 | 0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6713505 | 0.82[CHB][hapmap] |
rs6736347 | 0.82[CHB][hapmap] |
rs6760383 | 0.82[CHB][hapmap] |
rs717601 | 0.82[CHB][hapmap] |
rs730468 | 0.82[CHB][hapmap] |
rs7560538 | 0.82[CHB][hapmap] |
rs7582461 | 0.82[CHB][hapmap] |
rs7584662 | 0.82[CHB][hapmap] |
rs7588987 | 0.82[CHB][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv834359 | chr2:125367872-125536022 | Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS | TF binding regionCpG island | 1 gene(s) | inside rSNPs | diseases |
2 | nsv428727 | chr2:125372897-125512949 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS | TF binding regionCpG island | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:125455600-125460000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |