Variant report

Variant	rs12615271
Chromosome Location	chr2:141268835-141268836
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10928749	0.95[CEU][hapmap]
rs1113353	0.90[CHB][hapmap];0.84[JPT][hapmap]
rs11887888	0.95[CEU][hapmap]
rs12616000	0.85[AFR][1000 genomes]
rs1385765	0.91[CEU][hapmap]
rs1463614	1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap]
rs1463615	0.95[CEU][hapmap]
rs2171107	0.95[CEU][hapmap]
rs4583394	0.86[CEU][hapmap]
rs4588124	0.91[CEU][hapmap]
rs6430904	0.95[CEU][hapmap]
rs6430905	0.94[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754266	chr2:141023643-141270786	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv2756334	chr2:141166521-141285622	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
3	nsv459518	chr2:141218933-141282923	Enhancers Active TSS Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
4	nsv583191	chr2:141218933-141282923	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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