The 2.0 version of rSNPBase

Variant report

Variant rs12622044
Chromosome Location chr2:173318867-173318868
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173307400-173322400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:173307600-173321000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr2:173310800-173319800 Weak transcription Fetal Muscle Leg muscle
4 chr2:173310800-173320000 Weak transcription Lung lung
5 chr2:173310800-173322400 Weak transcription Thymus Thymus
6 chr2:173311600-173319000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr2:173311600-173319200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr2:173311600-173319200 Weak transcription HUVEC blood vessel
9 chr2:173311800-173319200 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr2:173312200-173319400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr2:173312200-173323600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:173312400-173319200 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr2:173313200-173319800 Weak transcription Fetal Kidney kidney
14 chr2:173313600-173323400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr2:173313800-173319200 Weak transcription HepG2 liver
16 chr2:173314200-173319200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr2:173314200-173319200 Weak transcription Hela-S3 cervix
18 chr2:173314400-173319400 Weak transcription Fetal Intestine Small intestine
19 chr2:173314800-173319000 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr2:173315000-173320000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr2:173315000-173320800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr2:173315200-173319400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr2:173315200-173324800 Genic enhancers NHEK skin
24 chr2:173315400-173319800 Weak transcription HSMM muscle
25 chr2:173315400-173320200 Weak transcription HSMMtube muscle
26 chr2:173316000-173320400 Enhancers Primary T helper cells PMA-I stimulated --
27 chr2:173316000-173320800 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr2:173316000-173322800 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr2:173316200-173320800 Genic enhancers HMEC breast
30 chr2:173316200-173321800 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr2:173316200-173321800 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr2:173316200-173323400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr2:173316200-173323800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:173316400-173319400 Weak transcription Primary monocytes fromperipheralblood blood
35 chr2:173316400-173319600 Enhancers Spleen Spleen
36 chr2:173316400-173321400 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr2:173316600-173319600 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr2:173316800-173319000 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr2:173317000-173322000 Genic enhancers Primary T cells from cord blood blood
40 chr2:173317000-173323800 Enhancers Stomach Mucosa stomach
41 chr2:173317200-173319000 Weak transcription Esophagus oesophagus
42 chr2:173317200-173319200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr2:173317200-173319800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr2:173317200-173322600 Weak transcription Brain Anterior Caudate brain
45 chr2:173317200-173325400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr2:173317400-173319000 Weak transcription Placenta Placenta
47 chr2:173317400-173319600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr2:173317400-173319600 Weak transcription Placenta Amnion Placenta Amnion
49 chr2:173317400-173320000 Weak transcription Left Ventricle heart
50 chr2:173317600-173319200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015