Variant report

Variant rs12628934
Chromosome Location chr22:20905622-20905623
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20864400-20913000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr22:20886000-20906000 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr22:20886000-20915400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr22:20887000-20906200 Strong transcription Fetal Intestine Small intestine
5 chr22:20890800-20923000 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr22:20893000-20907400 Weak transcription Hela-S3 cervix
7 chr22:20899400-20905800 Weak transcription Fetal Kidney kidney
8 chr22:20900600-20906400 Weak transcription H9 Cell Line embryonic stem cell
9 chr22:20900600-20912800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr22:20901200-20905800 Enhancers Placenta Placenta
11 chr22:20901200-20906400 Weak transcription Aorta Aorta
12 chr22:20902600-20906000 Enhancers HMEC breast
13 chr22:20902600-20906000 Genic enhancers K562 blood
14 chr22:20902600-20906200 Enhancers HUVEC blood vessel
15 chr22:20902600-20908200 Enhancers Left Ventricle heart
16 chr22:20902800-20905800 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr22:20902800-20905800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr22:20902800-20905800 Enhancers Primary B cells from peripheral blood blood
19 chr22:20902800-20905800 Enhancers Adipose Nuclei Adipose
20 chr22:20902800-20905800 Enhancers Skeletal Muscle Female skeletal muscle
21 chr22:20902800-20906600 Genic enhancers GM12878-XiMat blood
22 chr22:20902800-20907000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr22:20902800-20911000 Enhancers Fetal Heart heart
24 chr22:20903000-20905800 Enhancers Primary hematopoietic stem cells blood
25 chr22:20903000-20906200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
26 chr22:20903000-20906200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr22:20903000-20906200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
28 chr22:20903000-20906400 Enhancers Placenta Amnion Placenta Amnion
29 chr22:20903000-20906600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr22:20903000-20907000 Genic enhancers NHLF lung
31 chr22:20903000-20907400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr22:20903000-20907600 Enhancers Psoas Muscle Psoas
33 chr22:20903000-20908600 Enhancers Brain Angular Gyrus brain
34 chr22:20903000-20910000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr22:20903200-20906200 Enhancers Cortex derived primary cultured neurospheres brain
36 chr22:20903200-20906400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr22:20903200-20906600 Flanking Active TSS Primary T cells from cord blood blood
38 chr22:20903200-20907400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr22:20903200-20913200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
40 chr22:20903400-20906200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
41 chr22:20903400-20906200 Enhancers Gastric stomach
42 chr22:20903400-20906400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
43 chr22:20903400-20910200 Enhancers Right Atrium heart
44 chr22:20903400-20915200 Strong transcription NHEK skin
45 chr22:20903600-20905800 Enhancers Pancreas Pancrea
46 chr22:20903600-20906000 Enhancers HUES64 Cell Line embryonic stem cell
47 chr22:20903600-20906000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
48 chr22:20903600-20906200 Flanking Active TSS Primary T cells fromperipheralblood blood
49 chr22:20903600-20906600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
50 chr22:20903600-20906800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood

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