Variant report

Variant rs1477178
Chromosome Location chr22:20789688-20789689
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20783400-20790000 Weak transcription HSMMtube muscle
2 chr22:20783600-20789800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr22:20784200-20796200 Weak transcription Dnd41 blood
4 chr22:20785000-20789800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr22:20785200-20790200 Weak transcription Aorta Aorta
6 chr22:20785800-20789800 Weak transcription Muscle Satellite Cultured Cells --
7 chr22:20785800-20789800 Weak transcription Brain Angular Gyrus brain
8 chr22:20785800-20790000 Weak transcription HSMM muscle
9 chr22:20785800-20790000 Weak transcription HUVEC blood vessel
10 chr22:20786200-20789800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr22:20786200-20789800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr22:20786200-20789800 Weak transcription Left Ventricle heart
13 chr22:20786200-20789800 Weak transcription NH-A brain
14 chr22:20786200-20790000 Weak transcription Fetal Heart heart
15 chr22:20786200-20790800 Weak transcription Gastric stomach
16 chr22:20786400-20790800 Weak transcription Pancreas Pancrea
17 chr22:20786600-20789800 Weak transcription Colon Smooth Muscle Colon
18 chr22:20787000-20789800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr22:20787200-20789800 Genic enhancers Fetal Stomach stomach
20 chr22:20787400-20790000 Bivalent Enhancer Fetal Muscle Trunk muscle
21 chr22:20787800-20790400 Bivalent Enhancer Placenta Placenta
22 chr22:20788000-20790000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr22:20788400-20790200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr22:20788800-20789800 Enhancers Ovary ovary
25 chr22:20788800-20790000 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr22:20788800-20790000 Enhancers Osteobl bone
27 chr22:20788800-20790200 Bivalent Enhancer Fetal Muscle Leg muscle
28 chr22:20789000-20790000 Enhancers HepG2 liver
29 chr22:20789000-20790200 Enhancers Lung lung
30 chr22:20789200-20789800 Enhancers NHDF-Ad bronchial
31 chr22:20789200-20789800 Genic enhancers NHLF lung
32 chr22:20789200-20790000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr22:20789200-20790200 Genic enhancers Right Atrium heart
34 chr22:20789200-20790800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr22:20789400-20789800 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr22:20789400-20789800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr22:20789400-20789800 Bivalent Enhancer Rectal Smooth Muscle rectum
38 chr22:20789400-20790200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
39 chr22:20789400-20790400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr22:20789400-20790400 Enhancers Cortex derived primary cultured neurospheres brain
41 chr22:20789400-20790600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr22:20789600-20789800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
43 chr22:20789600-20789800 Enhancers Fetal Lung lung
44 chr22:20789600-20790000 Bivalent Enhancer Fetal Intestine Small intestine
45 chr22:20789600-20790200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr22:20789600-20790200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
47 chr22:20789600-20790400 Enhancers Right Ventricle heart
48 chr22:20789600-20792000 Flanking Active TSS Stomach Smooth Muscle stomach

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