Variant report

Variant rs874100
Chromosome Location chr22:20779822-20779823
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20773000-20781200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr22:20773000-20783000 Weak transcription HUVEC blood vessel
3 chr22:20776200-20780200 Enhancers Fetal Brain Male brain
4 chr22:20776800-20780600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr22:20777200-20780400 Enhancers Adipose Nuclei Adipose
6 chr22:20777200-20781000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
7 chr22:20777400-20783200 Weak transcription Dnd41 blood
8 chr22:20777600-20780800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
9 chr22:20777600-20781600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr22:20778000-20780000 Weak transcription Gastric stomach
11 chr22:20778000-20780400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr22:20778200-20780800 Weak transcription NH-A brain
13 chr22:20778200-20781200 Weak transcription H9 Cell Line embryonic stem cell
14 chr22:20778200-20781400 Weak transcription Osteobl bone
15 chr22:20778200-20783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr22:20778200-20785400 Weak transcription HSMM muscle
17 chr22:20778400-20780200 Weak transcription Pancreas Pancrea
18 chr22:20778400-20782400 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr22:20778600-20780800 Weak transcription HSMMtube muscle
20 chr22:20778600-20781400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
21 chr22:20778600-20786200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr22:20778600-20789400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr22:20779000-20780000 Weak transcription Liver Liver
24 chr22:20779000-20780200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
25 chr22:20779000-20780800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr22:20779000-20781400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr22:20779000-20781400 Weak transcription Colon Smooth Muscle Colon
28 chr22:20779000-20781600 Weak transcription HepG2 liver
29 chr22:20779000-20785000 Strong transcription Muscle Satellite Cultured Cells --
30 chr22:20779200-20780200 Active TSS Fetal Brain Female brain
31 chr22:20779200-20780400 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr22:20779200-20780600 Weak transcription Stomach Smooth Muscle stomach
33 chr22:20779200-20781200 Weak transcription Brain Anterior Caudate brain
34 chr22:20779200-20781600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr22:20779200-20782200 ZNF genes & repeats Spleen Spleen
36 chr22:20779200-20783000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr22:20779200-20783400 Weak transcription Brain Angular Gyrus brain
38 chr22:20779200-20784200 Strong transcription Ovary ovary
39 chr22:20779200-20784400 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr22:20779200-20784600 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr22:20779200-20785000 Weak transcription Left Ventricle heart
42 chr22:20779200-20785600 Strong transcription NHLF lung
43 chr22:20779400-20780200 Bivalent/Poised TSS Primary T regulatory cells fromperipheralblood blood
44 chr22:20779400-20780200 Bivalent Enhancer Colonic Mucosa Colon
45 chr22:20779400-20780400 Weak transcription Fetal Heart heart
46 chr22:20779400-20780600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
47 chr22:20779400-20780600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr22:20779400-20780600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
49 chr22:20779400-20780600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr22:20779400-20780600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood

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