Variant report

Variant rs12628193
Chromosome Location chr22:20791438-20791439
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20784200-20796200 Weak transcription Dnd41 blood
2 chr22:20789600-20792000 Flanking Active TSS Stomach Smooth Muscle stomach
3 chr22:20790000-20791800 Bivalent Enhancer Stomach Mucosa stomach
4 chr22:20790200-20791600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
5 chr22:20790200-20791800 Transcr. at gene 5' and 3' Right Atrium heart
6 chr22:20790200-20792000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
7 chr22:20790400-20791600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
8 chr22:20790400-20791600 Flanking Active TSS Right Ventricle heart
9 chr22:20790400-20791800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr22:20790400-20791800 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
11 chr22:20790400-20792000 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
12 chr22:20790400-20792000 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
13 chr22:20790400-20792000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr22:20790400-20792000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr22:20790400-20792400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
16 chr22:20790400-20792400 Active TSS HSMM muscle
17 chr22:20790400-20792600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
18 chr22:20790400-20792600 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
19 chr22:20790400-20792800 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr22:20790400-20792800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr22:20790400-20792800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr22:20790400-20792800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr22:20790400-20792800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr22:20790400-20792800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr22:20790400-20792800 Bivalent/Poised TSS Psoas Muscle Psoas
26 chr22:20790400-20793000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
27 chr22:20790400-20793000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
28 chr22:20790400-20793000 Active TSS Aorta Aorta
29 chr22:20790400-20793200 Active TSS Fetal Kidney kidney
30 chr22:20790600-20791800 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
31 chr22:20790600-20792000 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
32 chr22:20790600-20792400 Active TSS HepG2 liver
33 chr22:20790600-20792600 Bivalent/Poised TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr22:20790600-20792600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr22:20790600-20792600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
36 chr22:20790600-20792600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr22:20790600-20792600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
38 chr22:20790600-20792600 Active TSS Breast Myoepithelial Primary Cells Breast
39 chr22:20790600-20792600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr22:20790600-20792600 Active TSS Muscle Satellite Cultured Cells --
41 chr22:20790600-20792600 Active TSS Fetal Lung lung
42 chr22:20790600-20792600 Bivalent/Poised TSS Thymus Thymus
43 chr22:20790600-20792600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
44 chr22:20790600-20792600 Active TSS NHDF-Ad bronchial
45 chr22:20790600-20792800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
46 chr22:20790600-20792800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr22:20790600-20792800 Bivalent/Poised TSS Fetal Stomach stomach
48 chr22:20790600-20792800 Active TSS NHLF lung
49 chr22:20790600-20792800 Active TSS Osteobl bone
50 chr22:20790600-20793000 Active TSS Ovary ovary

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