The 2.0 version of rSNPBase

Variant report

Variant rs12632887
Chromosome Location chr3:56815851-56815852
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56793200-56817400 Weak transcription Hela-S3 cervix
2 chr3:56796800-56816400 Weak transcription Colonic Mucosa Colon
3 chr3:56805800-56816800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr3:56806400-56816800 Weak transcription Duodenum Mucosa Duodenum
5 chr3:56806400-56817000 Weak transcription NHEK skin
6 chr3:56807000-56833200 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:56807400-56816000 Weak transcription Fetal Intestine Large intestine
8 chr3:56807600-56818000 Weak transcription Fetal Muscle Trunk muscle
9 chr3:56807800-56817400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr3:56808200-56816800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr3:56808600-56816800 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr3:56809000-56816800 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr3:56810000-56816600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr3:56810000-56822200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr3:56810200-56817000 Enhancers Primary T helper cells fromperipheralblood blood
16 chr3:56810400-56816000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr3:56810400-56816400 Weak transcription Primary hematopoietic stem cells blood
18 chr3:56810400-56816400 Weak transcription Fetal Muscle Leg muscle
19 chr3:56810400-56817000 Weak transcription Right Ventricle heart
20 chr3:56810400-56817000 Weak transcription Spleen Spleen
21 chr3:56810400-56818000 Weak transcription Placenta Placenta
22 chr3:56810400-56819000 Weak transcription Fetal Brain Female brain
23 chr3:56810800-56816200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr3:56810800-56816400 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr3:56811000-56816400 Weak transcription Brain Anterior Caudate brain
26 chr3:56811000-56816400 Weak transcription Fetal Lung lung
27 chr3:56811600-56817000 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr3:56811800-56816200 Weak transcription HSMMtube muscle
29 chr3:56811800-56816400 Genic enhancers Dnd41 blood
30 chr3:56812000-56816000 Weak transcription Right Atrium heart
31 chr3:56812000-56816400 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr3:56812000-56816400 Weak transcription Brain Substantia Nigra brain
33 chr3:56812000-56817000 Weak transcription Brain Cingulate Gyrus brain
34 chr3:56812000-56817800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:56812200-56816000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr3:56812200-56816400 Weak transcription Adipose Nuclei Adipose
37 chr3:56812400-56818200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr3:56812400-56818600 Weak transcription Brain Angular Gyrus brain
39 chr3:56813000-56816000 Genic enhancers Primary T cells from cord blood blood
40 chr3:56813200-56816200 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr3:56813600-56816400 Enhancers Monocytes-CD14+_RO01746 blood
42 chr3:56813600-56816800 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr3:56814000-56816800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr3:56814000-56817600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr3:56814200-56816200 Weak transcription Primary B cells from cord blood blood
46 chr3:56814600-56826800 Enhancers Primary mononuclear cells fromperipheralblood Blood
47 chr3:56814800-56816000 Genic enhancers Primary T cells fromperipheralblood blood
48 chr3:56814800-56816800 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr3:56814800-56826600 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr3:56815000-56816000 Enhancers Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015