Variant report

Variant rs1906957
Chromosome Location chr3:56817428-56817429
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56807000-56833200 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:56807600-56818000 Weak transcription Fetal Muscle Trunk muscle
3 chr3:56810000-56822200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr3:56810400-56818000 Weak transcription Placenta Placenta
5 chr3:56810400-56819000 Weak transcription Fetal Brain Female brain
6 chr3:56812000-56817800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr3:56812400-56818200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:56812400-56818600 Weak transcription Brain Angular Gyrus brain
9 chr3:56814000-56817600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr3:56814600-56826800 Enhancers Primary mononuclear cells fromperipheralblood Blood
11 chr3:56814800-56826600 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr3:56815400-56820200 Enhancers Psoas Muscle Psoas
13 chr3:56815600-56818200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr3:56815600-56820000 Enhancers Skeletal Muscle Male skeletal muscle
15 chr3:56815600-56820800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
16 chr3:56815600-56823400 Enhancers Primary monocytes fromperipheralblood blood
17 chr3:56815800-56817600 Enhancers Sigmoid Colon Sigmoid Colon
18 chr3:56815800-56817600 Enhancers HMEC breast
19 chr3:56815800-56817600 Enhancers HUVEC blood vessel
20 chr3:56815800-56818200 Enhancers Fetal Kidney kidney
21 chr3:56815800-56818800 Enhancers Fetal Intestine Small intestine
22 chr3:56815800-56818800 Enhancers Small Intestine intestine
23 chr3:56815800-56819000 Enhancers Rectal Mucosa Donor 31 rectum
24 chr3:56815800-56819200 Enhancers Stomach Mucosa stomach
25 chr3:56815800-56819600 Enhancers Skeletal Muscle Female skeletal muscle
26 chr3:56815800-56819800 Enhancers Brain Hippocampus Middle brain
27 chr3:56815800-56820200 Enhancers Left Ventricle heart
28 chr3:56815800-56820800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr3:56815800-56824200 Enhancers Fetal Heart heart
30 chr3:56816000-56817800 Enhancers Fetal Intestine Large intestine
31 chr3:56816000-56818200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:56816000-56819600 Enhancers Right Atrium heart
33 chr3:56816000-56819800 Enhancers Liver Liver
34 chr3:56816000-56825400 Enhancers Primary B cells from peripheral blood blood
35 chr3:56816200-56818800 Enhancers Colon Smooth Muscle Colon
36 chr3:56816200-56819400 Enhancers HSMMtube muscle
37 chr3:56816200-56820800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:56816200-56827000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr3:56816400-56817800 Enhancers Primary hematopoietic stem cells blood
40 chr3:56816400-56817800 Enhancers Osteobl bone
41 chr3:56816400-56818200 Enhancers Primary Natural Killer cells fromperipheralblood blood
42 chr3:56816400-56818400 Enhancers Adipose Nuclei Adipose
43 chr3:56816400-56818600 Enhancers Duodenum Smooth Muscle Duodenum
44 chr3:56816400-56818800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr3:56816400-56818800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
46 chr3:56816400-56819000 Enhancers Fetal Lung lung
47 chr3:56816400-56819000 Enhancers Fetal Muscle Leg muscle
48 chr3:56816400-56819200 Enhancers Brain Anterior Caudate brain
49 chr3:56816400-56819600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
50 chr3:56816400-56819800 Enhancers Brain Inferior Temporal Lobe brain

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