Variant report

Variant	rs12635582
Chromosome Location	chr3:140911960-140911961
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10433433	1.00[ASN][1000 genomes]
rs10433434	0.93[ASN][1000 genomes]
rs10935419	0.91[ASN][1000 genomes]
rs11918595	0.88[ASN][1000 genomes]
rs72987316	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877550	chr3:140867094-140933231	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:140910600-140912400	Enhancers	Dnd41	blood
2	chr3:140911000-140912000	Enhancers	Primary T helper cells PMA-I stimulated	--
3	chr3:140911000-140912200	Enhancers	Fetal Thymus	thymus
4	chr3:140911400-140912200	Enhancers	Primary T cells from cord blood	blood
5	chr3:140911400-140912200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr3:140911400-140912200	Enhancers	Thymus	Thymus
7	chr3:140911400-140912400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr3:140911800-140912000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
9	chr3:140911800-140912400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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