Variant report

Variant rs12663103
Chromosome Location chr6:32161324-32161325
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32158000-32161800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr6:32158200-32161800 Flanking Active TSS Dnd41 blood
3 chr6:32158200-32162000 Flanking Active TSS Primary hematopoietic stem cells blood
4 chr6:32158200-32163400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr6:32158600-32161600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr6:32158600-32163000 Weak transcription Aorta Aorta
7 chr6:32158800-32162600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr6:32158800-32162600 Weak transcription HSMMtube muscle
9 chr6:32158800-32162800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:32159000-32161400 Active TSS Rectal Smooth Muscle rectum
11 chr6:32159000-32162000 Weak transcription Fetal Brain Female brain
12 chr6:32159000-32162200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr6:32159000-32163000 Weak transcription Psoas Muscle Psoas
14 chr6:32159200-32161600 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr6:32159200-32162000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr6:32159200-32162200 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr6:32159200-32162600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr6:32159200-32162600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:32159400-32162000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:32159400-32162200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
21 chr6:32159400-32162200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr6:32159800-32161800 Weak transcription Brain Germinal Matrix brain
23 chr6:32159800-32161800 Weak transcription Fetal Brain Male brain
24 chr6:32160200-32162200 Weak transcription Brain Cingulate Gyrus brain
25 chr6:32160400-32161600 Active TSS ES-I3 Cell Line embryonic stem cell
26 chr6:32160400-32162000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
27 chr6:32160400-32162000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
28 chr6:32160400-32162200 Weak transcription Brain Angular Gyrus brain
29 chr6:32160400-32162400 Weak transcription Brain Substantia Nigra brain
30 chr6:32160400-32162600 Weak transcription Pancreas Pancrea
31 chr6:32160400-32163000 Enhancers Spleen Spleen
32 chr6:32160600-32161600 Flanking Active TSS Primary T cells fromperipheralblood blood
33 chr6:32160600-32161600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
34 chr6:32160600-32161600 Enhancers Fetal Muscle Trunk muscle
35 chr6:32160600-32161600 Flanking Active TSS Fetal Thymus thymus
36 chr6:32160600-32161800 Enhancers Fetal Intestine Large intestine
37 chr6:32160600-32162000 Flanking Active TSS Primary B cells from cord blood blood
38 chr6:32160600-32162200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr6:32160600-32162800 Enhancers Fetal Stomach stomach
40 chr6:32160600-32163200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
41 chr6:32160600-32163600 Weak transcription Lung lung
42 chr6:32160800-32161400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
43 chr6:32160800-32161400 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr6:32160800-32161400 Weak transcription Fetal Kidney kidney
45 chr6:32160800-32161600 Enhancers Fetal Muscle Leg muscle
46 chr6:32160800-32161600 Active TSS Rectal Mucosa Donor 29 rectum
47 chr6:32160800-32161800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
48 chr6:32160800-32161800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr6:32160800-32161800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr6:32160800-32162000 Weak transcription H1 Cell Line embryonic stem cell

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