Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:142815726..142818546-chr6:142820153..142822884,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1013902	0.88[CEU][hapmap]
rs1467720	0.98[EUR][1000 genomes]
rs17071798	0.92[GIH][hapmap];0.82[TSI][hapmap]
rs2294765	0.88[CEU][hapmap];0.92[GIH][hapmap];0.83[MEX][hapmap];0.82[TSI][hapmap]
rs2294768	0.88[CEU][hapmap];0.92[GIH][hapmap];0.82[TSI][hapmap]
rs2294770	0.92[GIH][hapmap];0.86[TSI][hapmap]
rs2294773	0.92[GIH][hapmap];0.82[TSI][hapmap]
rs2328339	0.98[EUR][1000 genomes]
rs34701089	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4140531	0.88[CEU][hapmap]
rs6913116	0.88[CEU][hapmap]
rs714476	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7758750	0.88[CEU][hapmap]
rs9321871	0.81[EUR][1000 genomes]
rs9373343	0.88[CEU][hapmap]
rs9376689	0.88[CEU][hapmap]
rs9385994	0.90[GIH][hapmap];0.82[TSI][hapmap]
rs9389990	0.88[CEU][hapmap]
rs9403384	0.92[GIH][hapmap];0.82[TSI][hapmap]
rs9484645	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949088	chr6:142561402-143128849	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv1023426	chr6:142813845-142940262	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:142817200-142817800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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