Variant report

Variant	rs12681814
Chromosome Location	chr8:114168172-114168173
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10088226	0.93[YRI][hapmap]
rs10955648	0.86[YRI][hapmap]
rs12334397	0.80[ASN][1000 genomes]
rs12678623	0.86[YRI][hapmap]
rs12680523	0.93[YRI][hapmap]
rs1568552	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884331	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16884505	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16892635	0.80[ASN][1000 genomes]
rs1879739	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28721970	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3967800	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55810383	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61239354	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6995851	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72670752	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7817251	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7843856	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753595	chr8:113283214-114190390	Enhancers Weak transcription Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	esv2753160	chr8:113920441-114190390	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv2754581	chr8:114029421-114419106	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv831428	chr8:114102983-114320802	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv916637	chr8:114116303-114338450	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114168000-114168200	Enhancers	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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