The 2.0 version of rSNPBase

Variant report

Variant rs12690963
Chromosome Location chr7:116871759-116871760
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:116808400-116871800 Weak transcription Rectal Smooth Muscle rectum
2 chr7:116840000-116871800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr7:116844000-116872600 Weak transcription Right Ventricle heart
4 chr7:116849400-116872000 Weak transcription Primary monocytes fromperipheralblood blood
5 chr7:116859800-116872200 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr7:116859800-116873000 Weak transcription Brain Substantia Nigra brain
7 chr7:116859800-116878000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr7:116860400-116872800 Weak transcription Brain Angular Gyrus brain
9 chr7:116861000-116872000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr7:116863600-116871800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr7:116863600-116872200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr7:116863800-116872000 Weak transcription Primary hematopoietic stem cells blood
13 chr7:116863800-116872000 Weak transcription Brain Hippocampus Middle brain
14 chr7:116863800-116872200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr7:116864000-116873000 Weak transcription Fetal Brain Male brain
16 chr7:116866600-116871800 Weak transcription Fetal Intestine Large intestine
17 chr7:116868000-116872000 Weak transcription Fetal Lung lung
18 chr7:116869400-116871800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
19 chr7:116869600-116874400 Weak transcription Brain Germinal Matrix brain
20 chr7:116870000-116872000 Weak transcription Stomach Smooth Muscle stomach
21 chr7:116870000-116872400 Weak transcription Fetal Intestine Small intestine
22 chr7:116870000-116878600 Weak transcription Pancreas Pancrea
23 chr7:116870200-116872600 Weak transcription Aorta Aorta
24 chr7:116870400-116872000 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr7:116870400-116872600 Weak transcription Placenta Placenta
26 chr7:116870400-116873600 Weak transcription HSMMtube muscle
27 chr7:116870600-116872000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr7:116870600-116872200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr7:116870600-116872200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr7:116870600-116872400 Weak transcription Liver Liver
31 chr7:116870600-116872400 Weak transcription Left Ventricle heart
32 chr7:116870600-116872800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr7:116870600-116873000 Weak transcription Lung lung
34 chr7:116870800-116872200 Enhancers Dnd41 blood
35 chr7:116870800-116872400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr7:116871200-116873000 Weak transcription Placenta Amnion Placenta Amnion
37 chr7:116871200-116874800 Weak transcription Fetal Brain Female brain
38 chr7:116871400-116875400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr7:116871600-116873000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015